Rhizobium etli CFN 42: RHE_CH02099
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Entry
RHE_CH02099 CDS
T00317
Name
(GenBank) probable peptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH02099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH02099
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_CH02099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABC90883
RhizoBase:
RHE_CH02099
UniProt:
Q2K8F3
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All DBs
Position
complement(2197236..2199038)
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AA seq
600 aa
AA seq
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MLRIIVPLVLSLLCGTVAAEPLHGIAMHGEPALPPDYKHFPYVNPDVKKGGKITYGVVGT
FDNLNPFILKSMRTTARGMWDPEYGNLVYESLMQRSRDEPFTLYGLLAETVEWDEDRSFI
QFNLNPKAKWSDGQPVTPEDVMFTFELMRDKGRVPYSERLKVVSKMEKVGEHSVRFTFNE
KADRETPLIFGLFPVLPKHAVDPETFDRTSLTPPVGSGPYKVKTVKPGESITYERDPNYW
GKDIPAKVGTDNYDQITVQYFLQDTTLFEAFKKGDVDLYPDGNPGHWANAYNFPAATSGT
VIKDVFTPKLPSGMLGFVFNTRRPIFTDAKVREGLSLVFDFEWANKNLYSGAYKRTQSFW
QNSDLSSFGIPADAKEIALLGPIKDKIAPDILDGSYELPVTDGSGRDRNVLKQAVGLLNQ
GGYTIRGGKMLDASGRQLTFEIMTQNADQEKLAVAYQRSLQTIGIAASIRTVDDSQYQSR
TNSFDYDIIIKSYTSSLSPGTEQLGRWSSAARTQEGKDSFAGANDPDLDTLIDHVLRARS
NEDFTAAVRSYDRLLLSSHYVLPLYHMDQQWVARSKRIGHPDTVPLYGYQLPVWWDTSAQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctccggatcatcgtccccctcgtcctctccttgctatgtggcaccgtcgccgccgag
ccgctgcacggcatcgcgatgcatggcgagccggccttgccgcctgactataagcacttc
ccctacgtcaatcccgacgtgaagaagggcggcaagatcacctatggcgtcgtcggcacc
ttcgacaatctcaacccgttcatcctgaagagcatgcgcacgacagcgcgcggcatgtgg
gatccggaatatgggaacctcgtctacgaatcgctgatgcagcgctcccgcgacgagccc
tttacgctttacggcctacttgccgaaacggtcgaatgggatgaggacaggagcttcatc
cagttcaacctcaatccgaaggcgaaatggtccgacggacagccggtgacgccggaagac
gttatgttcaccttcgagctgatgcgagacaagggacgcgtgccttattccgaacgctta
aaagtcgtcagcaagatggagaaggttggtgaacacagcgtgcgcttcactttcaatgaa
aaggctgaccgcgagacgcccctgattttcggccttttccctgtattgccgaaacatgcg
gtcgatccggaaaccttcgaccgcacgtcgctgacgccgccggtcggttccggtccctat
aaggtgaagacggtgaaacccggcgagagcatcacctatgagcgggatccgaattactgg
ggcaaggacattccggcgaaggtcgggactgacaattacgaccagatcactgtccagtat
ttcctgcaggacacaacgctgttcgaagccttcaagaagggcgatgtcgacctctatccc
gacggcaatcccggccattgggccaatgcctacaatttccccgccgccacctccgggacc
gtgatcaaggatgtgttcacgccgaaactcccaagcggcatgcttggcttcgtgttcaac
acgcgccggccgatctttaccgacgcgaaggtgcgcgaaggcctgtcgctggtgttcgat
ttcgaatgggcgaacaagaacctttattccggcgcctacaagcgcacccagagcttctgg
cagaattccgatctatcaagcttcggcattcccgccgatgcgaaggaaattgcgttgctc
gggccgatcaaggacaaaatcgcacccgacattctcgacggcagttatgagctgccggtc
accgacggctccggccgtgaccgcaacgtgctgaagcaggcggttgggttgttgaatcag
ggcggctatacgatccggggtggcaagatgcttgacgcctccggccgccaactcaccttc
gagatcatgacgcagaatgccgaccaggagaagcttgccgtcgcctatcagcgttcgctg
cagacgatcggcatagcggcttcaattcgcactgtcgatgattcgcagtaccagagccga
accaacagctttgattatgatataatcatcaagtcctatacttcgtcgctgtcgcctgga
accgagcaactcggccgctggtcttcggctgcgcgcactcaggagggcaaggacagcttt
gccggcgccaatgatcccgatctcgacacgctgattgatcacgtattgcgggcacgctcg
aacgaggatttcactgccgcggtgcgctcatacgaccggttgctactatcgagccattac
gtgctgccgctgtatcatatggaccagcaatgggttgcccgcagcaagcgcattggccat
cccgacacggtaccgctttacggctaccagctgccggtctggtgggatacaagcgcccaa
taa
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