Rhizobium etli CFN 42: RHE_CH02139
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Entry
RHE_CH02139 CDS
T00317
Symbol
occPch
Name
(GenBank) octopine ABC transporter, ATP-binding protein
KO
K10021
octopine/nopaline transport system ATP-binding protein [EC:
7.4.2.1
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH02139 (occPch)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH02139 (occPch)
Enzymes [BR:
ret01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.1 ABC-type polar-amino-acid transporter
RHE_CH02139 (occPch)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
RHE_CH02139 (occPch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
DUF87
AAA_16
AAA_13
SbcC_Walker_B
AAA_22
AAA_23
RsgA_GTPase
PRK
YcaO_C
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABC90923
RhizoBase:
RHE_CH02139
UniProt:
Q2K8B3
LinkDB
All DBs
Position
complement(2241675..2242478)
Genome browser
AA seq
267 aa
AA seq
DB search
MSDRGTVLVSDNKDKSVAVSVKDLRKCFGPLEVLKGISLEAHEGDVISILGSSGSGKSTM
LRCLNMLEIPDSGEIRIGGEMYALKKSGRRTVPADRRQVDRMREHIGMVFQNFNLWSHMT
ILENVIEAPVHVQKRNRAECIAEAEALLERVGIAEKRNFYPAHLSGGQQQRAAIARALAQ
RPRVMLFDEPTSALDPELVGEVLKVMRSLAEEGRTMLVVTHEMAFARDVSSKVVFLHRGV
VEEAGEPSELFRHPKSDRFRQFLAGTR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaggggaacagttttggtgagcgacaacaaggacaaaagcgttgccgtttcg
gtcaaggatctccgcaaatgcttcggcccgctggaagtgctgaagggaatttcgcttgaa
gcgcatgagggggacgtgatttcaatcctcggctcatccggctccggcaaatcgacgatg
ctgagatgcctcaatatgctcgaaatccccgacagcggggaaattcgcatcggcggcgag
atgtacgctctgaagaaatcggggcgtagaacggtgccggctgaccgcaggcaagtcgac
cggatgcgcgaacacatcggcatggtgtttcagaatttcaatctttggtcgcacatgacc
attcttgaaaatgtgatcgaagcaccggtgcacgtgcagaagcgcaaccgcgcggaatgt
atcgcggaggccgaagctctgctcgaacgggtcggcatcgccgaaaaacgaaatttctat
ccggcgcatttgtctggcgggcagcagcaacgggctgcgattgcccgcgctctcgcgcag
cggccgagggtcatgctgtttgacgaaccgacctcggcgctggatcccgaactcgtcggc
gaagtgctgaaagtgatgcgctcgctcgctgaggaaggtcgaaccatgcttgttgtcacc
catgaaatggccttcgcccgagacgtgtcgagcaaggtggtttttcttcaccggggcgtc
gtcgaagaagcaggggagcccagcgagcttttcaggcatccgaaatcggatcggttccgc
cagtttctggcagggacgaggtga
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