Rhizobium etli CFN 42: RHE_CH02144
Help
Entry
RHE_CH02144 CDS
T00317
Symbol
occT
Name
(GenBank) octopine ABC transporter, substrate-binding protein
KO
K10018
octopine/nopaline transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH02144 (occT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH02144 (occT)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
RHE_CH02144 (occT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
ABC90928
RhizoBase:
RHE_CH02144
UniProt:
Q2K8A8
LinkDB
All DBs
Position
2245949..2246791
Genome browser
AA seq
280 aa
AA seq
DB search
MQVSKLLLTSALLGVMSAGTAAAQTKPTEITIATEGAYEPWNFTGPDGKLAGFEIDLAND
LCARMKVKCTIVAQDWDGLIPSLTAKKFDAIMASMIVTEKRLAVISFSKPYAPTAAAFMV
EKTGPLADLPGTGTTVDLAADKAKVEQELQPLRDALKGKAVGAQVSTANAVFLDTYFKGV
VDPREYKTVEQHDLDLQAGRIDAVVAQKTSLTATLGKDDFKDYKIAGPTFKGGVFGQGIA
AGLRKDDTVLKSMFDAAIEAAEADGTINKLAQKWIKTSLD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtatcaaaacttttgctgacttccgctttgctcggcgtcatgtcggccggcact
gccgctgcgcagacgaaaccaaccgaaatcaccatcgcgaccgagggcgcctacgagccc
tggaattttaccggtcctgacggcaagctggcagggttcgagatcgatctcgccaatgac
ctgtgcgcgcgcatgaaggtgaaatgcaccatcgtggcgcaggactgggatgggctcatt
ccatcgctcacggccaagaaattcgacgccatcatggcctctatgatcgtgaccgaaaag
cgcctcgccgtcatctccttcagcaaaccctacgctccgaccgccgccgctttcatggtc
gagaaaaccggtcctcttgcagatctgccggggaccgggacgacagtcgacctcgctgcg
gacaaggcgaaggtggagcaggaattgcagccgcttcgggacgctctcaaaggcaaggcc
gtgggcgcccaggtgtcgacggcgaacgcagtctttctcgatacctatttcaagggcgtt
gtcgatccaagagaatacaagaccgtcgagcagcatgatctcgacctccaggccggtcgc
atcgacgccgtcgtcgcgcagaaaacttcgttgactgcaacgctcggcaaggacgacttc
aaggactacaagatcgccggcccgaccttcaaaggcggggtctttggacaggggatcgcg
gcaggtcttcgcaaggacgatacggtgttgaagtcgatgttcgacgcggccatcgaagcg
gcggaagccgacggcacgatcaacaaacttgctcagaaatggatcaagacatcccttgat
tga
DBGET
integrated database retrieval system
