Rhizobium etli CFN 42: RHE_CH02249
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Entry
RHE_CH02249 CDS
T00317
Name
(GenBank) putative selenocysteine lyase protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00450
Selenocompound metabolism
ret01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RHE_CH02249
Enzymes [BR:
ret01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RHE_CH02249
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RHE_CH02249
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
ABC91029
UniProt:
Q2K807
LinkDB
All DBs
Position
complement(2348820..2350061)
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AA seq
413 aa
AA seq
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MDKIAPATPYDVEAIRRDFPILAEKVHGKPLVYLDNGASAQKPQVVIDAISHAYAHEYAN
VHRGLHYLSNIATDAYEAAREKVRRFLNAPSVNDIVFTKNSTEAINTVAYGWGMPQIGEG
DEIVLTIMEHHSNIVPWHFIRERQGAKLVWVPVDDEGAFNIEDFEKSLTERTKLVAITHM
SNALGTIVPVKEVCRIAHERGIPVLIDGSQGAVHLPVDVLDIDCDWYVMTGHKLYGPSGI
GVLYGKKERLAQMRPFQGGGEMIFEVAEDAVTYNDPPHRFEAGTPPIVQAIGLGYALDYM
EKVGREAIARHEADLAAYAVERLKSVNSLRVFGTAPDKGSIFSFELAGIHAHDVSMVIDR
QGIAVRAGTHCAMPLLKRFGVTSTCRASFGMYNTRAEVDALADALEYARKFFA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgcaccggccacgccatacgacgtcgaagccatccgccgggattttccg
atcctggcggagaaggtgcacggcaagccgctggtctacctcgacaacggtgcctcggcc
cagaagccgcaggtggtgatcgacgccatctcgcatgcctacgcccatgaatatgccaat
gtgcatcgcggcctgcattatctctccaatatcgcgacggatgcctacgaggcggcgcgc
gagaaggtacgccgctttctcaatgccccttcggtgaacgatatcgtcttcaccaagaat
tcgactgaggcgatcaacaccgtcgcctatggctggggcatgcctcagatcggcgaaggt
gacgagatcgtcctgacgatcatggagcaccactccaacatcgtgccctggcacttcatc
cgcgagcggcagggcgcgaaactggtctgggtgccggttgacgacgagggcgccttcaat
atcgaggatttcgagaaaagcctgacagagcgcaccaagctcgtcgccatcacccatatg
tcgaacgcgctcggcacgatcgttcccgtcaaggaggtctgccgcatcgcccatgagcgg
ggcattccggtcttgatcgacggcagccagggcgccgtacatctgccggtcgacgtgctg
gatatcgattgcgactggtacgtcatgaccggccacaagctctacggcccgtctggcatc
ggcgtgctttacggcaagaaggaacggcttgcccagatgcgcccgttccagggcggcggc
gagatgattttcgaggttgccgaggatgcggtcacctacaacgatccgccgcatcgcttc
gaagccggcacgccgccgatcgtccaggcgatcgggctcggctatgcgctcgactatatg
gagaaggtcggccgcgaggcgatcgcccggcatgaggccgatcttgccgcttacgcggtc
gagcggctgaaatcggtcaattcgctgcgcgtcttcggcacggcgcctgacaagggcagt
atcttttccttcgagcttgccggcatccacgcccacgacgtctcgatggtgatcgaccgg
cagggcattgcagtgcgtgccggcacgcattgcgccatgccgctcttgaaacgcttcggc
gtcacctccacatgccgtgcatccttcggcatgtacaatacgcgcgccgaggtcgatgcc
ctggccgatgcgcttgaatatgcgcgcaagttctttgcttga
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