Rhizobium etli CFN 42: RHE_CH02340
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Entry
RHE_CH02340 CDS
T00317
Name
(GenBank) hypothetical conserved protein
Organism
ret
Rhizobium etli CFN 42
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
DUF1664
GAS
Motif
Other DBs
NCBI-ProteinID:
ABC91120
RhizoBase:
RHE_CH02340
UniProt:
Q2K7R6
LinkDB
All DBs
Position
2439999..2446973
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AA seq
2324 aa
AA seq
DB search
MANNKYSESIEDKAFKALDEALQIDFGKDNVPSRRGDAPQAPEGNVSDPSNARNQQGQEE
AQRRSRRGAGAEQASRASAFAPANDASRNTPASILKSFDGASSRSAMRTATLFSVLWVMA
GLGLMSLLYAPQIWQIRSIADLVALPGVIAGLVGIIIPVMMFYAFAIMISRAQDMRNAAR
SMAEVALRLAEPETIASERIMTVGQAVRREVSAMNEGIERTIARASELETLVHSEVNALE
RSYADNELRVRGLVHELGSEREAIVNHADRIRTSIGSVHDQLKEELSLATEEIAVRLATS
GEAFASLIDTRAATILEKSDSALQSMGSLLAAKTDSLLQTLNASGFALATEFDNRLEALS
VNLNEHGERLLSQFETRASTMDSSTEKLNAALNERTHQLNEILIARTREINESLTSGERT
ISGTLDDVLSKLNSALDEKGATFRQSLQNTADDAVMDLDLRSGFFEERLQTTVAQLSTAF
DERVAEFTSAFDKRTGSLDTKLMESLARINETLSGGSDSIEGILSSSIDRLGSSMTDQSL
ALATALATGHEVLESTLNSHTEEITTALTSRTGELTSALQSATSDIALALASGTSDLHNN
LQARSAEFRDTLRTTTTDLTAAVAAGTEQVTTAFGGRAEELTSVLTARAAEIRDAVGTAH
ERIDSVMAERGGALIDALTTHHGRFEEALTTRSDAIINAVSGTHDRLSETLDEKAMALAI
SLNESQSRIEDTLETRSAAFLNAVSGTHERLSETLDTKAAALTTSLDERHARIEDALGTR
AEALLNSVSGTSDRLAETLDEKVMALAISLNESQARIEETLENGSAGLLNAVSGTHDRFA
ETLQDKAAAFANSLNETQARIEDTLETRSAALLNAVSGTHDRLSETLDEKAMALAISLTE
GQARIEDTLQTRSAALLNAVSGTHDRLSETLDEKAMALAISLNENQTRIEDTLEARSEAF
LKAVSGAHERIAETLDEKASALTASLNEGQSRLQDTLESRSESFLNAVSATHDRLSETLD
DRAMALAISLNESQSRLEETLTSGADAITNAVSGTHERLNGVLDQKASALAASLNEGQVR
LEEALGHRAAALVGAVTASHDRLTDTLDEKTMALAISLDDNQSRFDSALEARSNAIMEAV
TSAEARVAGAFADKTDAIHNAYADNQRRLESALSEHSAALSGVLDAGGARFEDLVGGLTG
RIEGRLSDAHARLGSMAEEAAARIEGGLASAHERIRTTLEDRGNAIELSLSQAHAQISDT
LTEQATSIGTSVATSVSMLEMSLEDREASIRQAIDAGAQTLEDRMRAGAGQIAGRFQEAA
NTISSSAQNLSAHLDQSVENLAGRLEETGSRMEAGLTAIETRIRDGVGGVAEKVEAATSQ
LSGVLTDGISRLGALGDEATQRISTTLEGSAANLTQAIDSRTANLAETLDSRTTTLAGAI
EGRTASLGETLDRGNERIEERLSTMDRALTVGLDAVNRTIEGKAAGLASTLRSAVAEAAQ
GMEGEATRTTELLGKTGQQFAQDLNAKSDEFTRTMDERSSQIVTRVAEAQNRLATQAAAV
AQTFSEAGNAIVNKVAEAETVVGTQVNAISRALSEAGQSLEARGNAIRTTLSGAGSEISA
TMADVERALEARSSAIRSNLEERAREIDTSLSDVDRALEARGNSIRSTLEERTRDLNSML
SGRSVELTRILDETARPIIDRYTDAGEQAAARITAAANLSADRLRAENEALASAVAARTE
NVANAVSAIENSLVGNVNGLVQRMSESSAAMAMMMNRAAEQLTSVDERLGETTTRFADSA
TKAAEMVNASTRLLEGKVDRLSDISGQTLAQVGSIIGRFDEHSKVLTQASQLLGAAQSNL
ASTLEEREGALQALSVSLVQRSDEIEKTMRGLGGMIETVFERAEQRSNQVTGNLRQGVQS
SFADIGRILTETEKRAQEAAETMREAITRAGDEANTTIDSTFANVERRSGDLSNRIRGGL
TASLSEVERMLGEAGRASDGAAQHMRESLREAIEDAVGRFSGATEDIRRSAADIRNELDA
TRAELKRGAFDLPEEAKESASAMRRAVAEQIKALQDISQLVGRSSQQLEISEPTARSLAQ
AQPTPRPTPPIAAQPPQPAAPPPIEAAGLRGTIAPSAPAATPQRAVQQPVPTRQELGRQE
PPRESGGWISDLLRGASREEAADAAPARVPARSAETAAPAARSNDSRNPRHVVESLNSLS
VDIARAIDHDASVDLWRRYQRGERDVFTRRLYTLKGQQTFDEIKRKYDREPEFRTAVDRY
IGDFEKLLADVARTDPNQTVTQSYLTSDTGKVYTMLAHAAGRLR
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacaaatatagcgagtcgatcgaggacaaagcgttcaaggcgttggacgag
gcgctccagatcgacttcggcaaggataacgtgccgtctcgccgcggcgacgcgccgcag
gcgccggagggtaatgtgtctgatccatcgaatgcgcgcaatcagcagggccaggaagaa
gcgcagcgccgcagccgccgcggcgccggggccgagcaggcttccagggcttcggccttc
gcgcccgccaatgatgccagccgcaacacgcccgcgtcgatcctgaaatccttcgacggc
gcttccagccgctcggccatgcgcaccgccaccctgttttccgtgctttgggtcatggcg
ggcctcggcctgatgtcgctgctttatgcgccgcagatctggcagatccgctcgatcgcc
gatctcgtcgccctgcccggcgtcattgccggcctggtcggcatcatcattccggtgatg
atgttctatgctttcgccatcatgatctcccgcgctcaggacatgcgcaacgccgcccgc
tccatggcagaggtggcattgcgcctggcggagccggaaaccatcgcctccgaacgcatc
atgaccgttggccaggcggtgcgccgcgaggtctcggcgatgaacgaaggcatcgagcgc
accatcgcgcgcgcttccgagctggaaacgctggttcattccgaagtcaacgctctcgaa
cgctcctatgccgacaacgagttgcgtgtgcgcggtcttgtccatgaactcggttcggag
cgagaggcgatcgtcaatcatgccgaccgcatccgcacctcgatcggcagcgtccacgac
cagctgaaggaagaactgtcgctggcgaccgaagagatcgccgtgcgactcgccacatcg
ggcgaagccttcgcctcgttgatcgacacgcgcgcggcgacgatcctggagaaatcggac
agcgccctgcagtcgatgggcagcctgcttgccgccaagaccgacagcctgctccagacg
ctcaacgcctccggctttgcgctcgccaccgaattcgacaaccgcctcgaagcgctttcc
gtcaacctcaacgaacacggcgaaagacttctcagccagttcgagacgcgcgcttcgacc
atggacagcagcaccgagaagctgaacgcggcgctgaacgagcgtacgcatcagctgaac
gagatcctgatcgcccgcacccgcgagatcaacgagagcctgacatctggcgaacgcacc
atcagcgggacgctcgacgatgtgctctcaaagctgaacagcgcgctcgatgagaagggc
gcaaccttccgccagagcctgcagaacactgccgacgacgccgtcatggatcttgatctg
cgctccggcttcttcgaagagcgcctgcagacgaccgttgcccagctgtcgaccgccttc
gacgagcgtgtcgccgaattcaccagcgctttcgacaagcgcaccggctcgctcgacacc
aagctgatggagagccttgcccgcatcaacgaaacgctgagcggcggttcggattcgatc
gagggcattttgagctccagcatcgaccggctcggctcctcgatgaccgaccagtcactg
gcgctcgcgacagcgctcgcaaccggtcatgaagtgctggagagcacgctaaatagccac
accgaagaaatcaccaccgcactcaccagccgcaccggcgagctgacctcggctctgcag
agcgccacgtcggacatcgcgctggcgcttgcatcaggcacctccgacctgcacaacaat
cttcaggcccgctcggccgaattccgcgatacgctgcgcacaaccaccactgatttgacc
gccgccgttgccgccggcaccgagcaggtcacgacggccttcggcggccgcgccgaggaa
ctgaccagcgtattgacagcgcgcgccgcagaaatccgggacgcggttggcacagcccat
gagcgtatcgacagcgtcatggcggagcgcggcggagcgctgatcgatgcgctgaccacc
catcacggccgcttcgaggaagcgctgacgacccgctccgacgccatcatcaacgccgtt
tccggcactcatgaccgcctctccgaaacgctcgacgaaaaggcaatggcgctcgccatc
tcgttgaacgaaagccagagccgcatcgaagacacgctggagacccgttccgcagccttc
ctcaacgccgtctcgggcacgcatgagcggctgtcggaaacgctggataccaaggcagcg
gccctgacgacctcgttggacgagcgccatgcccggatcgaggacgcgctcggaacccgc
gccgaagcattgttgaacagcgtgtccggcacgagcgaccggcttgccgaaacccttgat
gaaaaggtgatggcgcttgccatttccttgaacgaaagccaggcccggatcgaggaaacg
ctggaaaacggttccgcaggcctgctgaacgccgtctccggcacccatgaccggtttgct
gagacgctgcaagataaggcggcagcttttgccaactcgctgaacgagacgcaggcacgc
atcgaagatacgctcgaaacccgttccgcagccctgctgaatgcagtatccggcacccat
gaccgtctctccgagaccctggatgaaaaggcgatggcgcttgccatctcactgaccgaa
ggtcaggctcgcatcgaggacacgctgcagacccggtcggcggcgctgctgaatgccgtt
tccggcactcatgaccggctgtcggaaacactggacgagaaggcgatggcgctcgcaatc
tctctcaacgagaaccagacgcggatcgaagacacgctggaagctcgctccgaagctttc
ctcaaggcggtctccggtgcgcatgagcgtatcgccgaaacccttgacgagaaggcatcg
gcacttaccgcctccttgaacgaaggccagagccgcctgcaggacacgctggagagccgc
tcggaatccttcctgaatgcggtttcggccacccatgaccgcctgtccgagacgctcgac
gatcgagcgatggcccttgccatttcgctgaacgagagccagagccgcctcgaggagacg
ctgacatcaggtgccgacgcgatcaccaatgcggtctccggcacacatgaacgtctgaac
ggcgtgctcgaccagaaggccagcgccctggccgcctcgctgaacgaagggcaggtccgc
ctcgaggaagccctgggacaccgcgccgccgcgctcgtcggtgccgtaacggcaagccat
gaccggctcaccgatacgctcgatgaaaagaccatggcgctcgccatttcgctcgatgac
aaccagagccgcttcgacagcgccctcgaagcccgcagcaatgcaatcatggaggccgtc
accagtgcagaggcccgcgtcgccggcgcctttgccgacaagacagacgccatccacaac
gcctatgccgacaatcagcggcggcttgaatccgccctctccgagcacagcgcggcgctt
tcgggcgttctcgatgcgggcggtgcccgcttcgaggatctcgtcggcggcttgaccggg
cgcatcgaaggccgcctcagcgatgcccatgcgcggctcgggagcatggccgaggaggcc
gcggcgcgcattgaaggcgggctcgcttctgcccatgagcgcatccgcacgacgcttgag
gatcgcggcaatgccatcgagctgtcgctgagccaggcgcatgcgcagatcagcgatacg
ctgaccgaacaggcgaccagcatcggcacttcggtggcgacaagcgtcagcatgcttgaa
atgtcgctggaagaccgtgaagcctcaattcgccaggcgatcgatgccggtgcccagaca
ctggaagatcgtatgcgtgccggcgctggtcagattgccggccgcttccaggaggcggcg
aacacgatttcgagctccgcccagaacctatccgcccatctcgaccagtcagtcgagaac
cttgcgggacgtcttgaagaaaccggttctcgcatggaggccggtcttacggcgatcgag
acccgcatccgtgacggcgtcggcggcgttgccgaaaaggtcgaagccgccaccagtcaa
ctctccggcgtgcttaccgacggcatttcccggctcggcgcgctcggtgacgaggccacc
caacgcatctcgacgacgctcgaaggcagcgccgccaatcttacgcaggcaatcgacagc
cgcaccgccaatctggccgagacgctggacagccgcacgaccacgctcgcaggcgccatc
gaaggccgtacggcaagtctcggcgaaacccttgaccgcggcaacgaacgcatcgaggaa
cgcctctccaccatggatcgcgcgttgaccgtcggcctcgacgctgtcaaccggaccatc
gagggcaaggccgccggcctcgcctcgacgctgcgtagcgcggtggccgaagcagcccag
ggaatggaaggcgaagcgacgagaacgactgaactgctcggcaagaccggccaacagttc
gcccaggatctcaatgcgaaaagcgacgaattcacccgcaccatggatgagcgctcgtcg
cagatcgtcacgcgggttgccgaagctcagaaccgcctggcaacccaggccgctgctgtc
gcccagaccttctcggaagccggcaatgccatcgtcaacaaggtcgccgaggccgagacg
gttgtcggcacgcaggtcaatgccatttccagggcgttgtcggaggccggccagtctctc
gaggcgcgcggcaatgccatccgcacgacgctgtcgggggccggcagcgagatctccgcc
accatggcggatgtcgagcgggcgctcgaggcccgcagcagcgccatccgctccaatctc
gaagaacgtgcccgcgagatcgatacctccctctccgacgtcgaccgggcgctcgaagcg
cgtggcaactcgatccgctcgacgcttgaggaacgcacccgcgacctcaactcgatgcta
tcaggccgctctgtcgaattgacccgtatcctcgacgaaacggcccgcccgatcatcgat
cgctacaccgatgccggcgaacaggccgctgcccgcatcaccgcggcagccaacctcagc
gccgatcgcctgcgcgccgagaatgaagcgctcgccagcgccgtcgccgcccgcaccgag
aatgtcgctaacgccgtcagcgccatcgagaacagcctggtcggcaacgtcaacggtctg
gttcagcgcatgtcggaaagcagcgcggcgatggcgatgatgatgaaccgcgccgccgag
cagctgacgagcgtcgacgagcgtctcggcgaaaccacgacccgctttgccgactccgcc
accaaggctgccgaaatggtcaacgcctcgaccagacttctcgaaggcaaggtcgaccgc
ctctccgacatctccggccagacgctggcccaggtcggcagcatcatcggccgcttcgac
gaacactccaaggttctgacccaggcctcgcagcttctgggtgccgcccagtccaacctc
gcctcgacgctcgaggagcgtgaaggcgcgctgcaggccctctccgtcagcctggtccaa
cgctccgacgagatcgaaaagaccatgcgcgggctcggcggcatgatcgagaccgtgttc
gagcgggccgagcagcgctccaaccaggtcaccggcaacctgcgccaaggtgtacagtcc
tcctttgccgatatcggccgcattctgacggaaaccgagaagcgcgctcaggaagcggcc
gaaacgatgcgcgaggcgatcacccgcgccggcgacgaggccaatacgacgatcgacagc
accttcgccaatgtcgagcgccgttccggcgatctctccaaccgtattcgcggcggcctc
accgcctcgctgtcggaagtcgagcgcatgctcggcgaagccggccgcgcctccgacggt
gccgcccagcacatgcgggaatcgttgcgtgaggcgatcgaggatgccgtcggtcgcttc
tccggcgccaccgaggacatccgccgctccgctgccgacatccgcaacgaactcgacgcc
acccgcgccgaactgaagcgcggcgccttcgacctgcccgaggaagccaaggaaagcgcc
tcggccatgcgccgcgccgtcgccgaacagatcaaggccctgcaggatatctcgcagctt
gtcggccgctccagccagcagctcgaaatctccgagcccaccgcccgctcgcttgcccag
gcgcagccgaccccgcgcccgaccccgccaatcgcagcccagccgccgcagccggcagcg
cctccgccgatcgaagcggcgggtctgcgcgggacgattgcgccgtccgctccggccgcc
actcctcagcgggccgttcagcagccagtccccactcgccaggagttgggccggcaggaa
ccgccgcgggaaagcggcggctggatcagcgatcttctgcgaggagcatcccgcgaagag
gccgcggacgcggcgccggcccgtgttcccgcccgctcggcggaaaccgccgcaccggcc
gcacgcagcaacgacagccgcaatccgcgccatgtcgtggaatcgctgaattcgctctcc
gtcgatatcgcccgcgccatcgatcacgatgcgtcggtcgatctctggcgccgctaccag
cgcggcgagcgcgacgtcttcacccgccgcctctacacgctgaagggccagcagaccttc
gacgagatcaagcgcaaatacgaccgcgaaccggaattccgcaccgccgtcgatcgctac
atcggcgatttcgaaaagctgctcgccgacgtcgcccgcaccgacccgaaccagactgtc
acccagtcatacctcacctcggatacgggcaaggtctacaccatgctcgcccatgcagcg
ggcaggctccgctag
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