Rhizobium etli CFN 42: RHE_CH02633
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Entry
RHE_CH02633 CDS
T00317
Name
(GenBank) putative RTX toxin hemolysin-type protein
Organism
ret
Rhizobium etli CFN 42
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ABC91405
UniProt:
Q2K6Y1
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Position
complement(2743047..2747027)
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AA seq
1326 aa
AA seq
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MRLRSSSMRRSPTTGRRSRRGAAGSGDPSASGKLAVSDVDDGEAVFAAPASLNGIYGSFT
FDAASGSWSYMLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVV
DATVTDDRATVEAGAAGSGDPSASGKLAVSDVDDGEAVFAAPASLNGIYGSFTFNAASGS
WSYMLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDD
RATVEAGAAGSGDPSASGKLAVSDVDDGEAVFAAPASLNGIYGSFTFNAASGSWSYMLDN
NRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAG
AAGSGDPSASGKLTVSDVDDGEAVFAAPASLNGIYGSFTFNAASGSWSYTLDNNRAATQA
LNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDP
SASGKLTVSDVDGGEAVFAAPASLNGIYGSFTFDAASGSWSYTLDNNRAATQALNQGDAV
SDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDPSASGKLA
VSDVDDGEAVFAAPASLNGIYGSFTFDAASGSWSYMLDNNRAATQALNQGDAVSDTLSVS
SLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDPSASGKLAVSDVDGG
EAVFAAPASLNGIYGSFTFDAASGSWSYMLDNNRAATQALNQGDAVSDTLSVSSLDGTAS
HNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDPSASGKLAVSDVDDGEAVFAAP
ASLNGIYGSFTFNAASGSWSYTLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAI
TGANDAASIVVDATVTDDRATVEAGAAGSGDPSASGKLAVSDVDDGEAVFAAPASLNGIY
GSFTFDAASGSWSYMLDNNRAATQALNQGDAVSDTLSVSSLDGTASYNIVVAITGADDGP
ARQAPTDIKLTPVVPADNVNFNSFEFSGLLSATDPDTGGFSFNIASQSNPGLFSITGNTL
SSNALSTNGTFSVTVTATQTGDPIGPAFEKTETFTIITGGNGNSVDNPTGGTGDDVLYGG
GGNDMMFGLGGDDTLFGQDGNDTLNGGVGNNTLTGGVGDDTFFFQKFTTTTNHMTDFNAG
TNSTAVDKFQLDVGGGTFEFAVGNNNTSVDNVKVGNNGTINVAGTEIGIKTDVSVTNATV
QSTINGYSNITTGALFVFHNTDLGHVAVYYDQNPSSAGGAVLVAEFDNITTLGGLANFNS
GDFLFG
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttcgatcgtcgtcgatgcgacggtcaccgacgaccgggcgacggtcgaggcgg
ggggcggccggcagcggcgatccgagtgcctccggcaagctggcggtcagcgatgttgac
gacggcgaggcggtgtttgccgccccggcctcactcaacggcatctatggcagcttcacc
ttcgatgccgccagcggcagctggagctatatgctcgacaataaccgggcggcgacgcag
gcgctcaaccagggcgacgcggtcagcgacacgctgagcgtcagctcgctcgacggcacc
gccagccacaatatcgtcgtcgccatcaccggcgccaacgatgcggcttcgatcgtcgtc
gatgcgacggtcaccgacgaccgggcgacggtcgaggcgggggcggccggcagcggcgat
ccgagtgcctccggcaagctggcggtcagcgatgttgacgacggcgaggcggtgtttgcc
gccccggcctcactcaacggcatctatggcagcttcaccttcaacgccgccagcggcagc
tggagctatatgctcgacaataaccgggcggcgacgcaggcgctcaaccagggcgacgcg
gtcagcgacacgctgagcgtcagctcgctcgacggcaccgccagccacaatatcgtcgtc
gccatcaccggcgccaacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgac
cgggcgacggtcgaggcgggggcggccggcagcggcgatccgagtgcctccggcaagctg
gcggtcagcgatgttgacgacggcgaggcggtgtttgccgccccggcctcactcaacggc
atctatggcagcttcaccttcaacgccgccagcggcagctggagctatatgctcgacaat
aaccgggcggcgacgcaggcgctcaaccagggcgacgcggtcagcgacacgctgagcgtc
agctcgctcgacggcaccgccagccacaatatcgtcgtcgccatcaccggcgccaacgat
gcggcttcgatcgtcgtcgatgcgacggtcaccgacgaccgggcgacggtcgaggcgggg
gcggccggcagcggcgatccgagtgcctccggcaagctgacggtcagcgatgtcgacgac
ggcgaggcggtgtttgccgccccggcctcactcaacggcatctatggcagcttcaccttc
aacgccgccagcggcagctggagctatacgctcgacaataaccgggcggcgacgcaggcg
ctcaaccagggcgacgcggtcagcgatacgctgagcgtcagctcgctcgacggcaccgcc
agccacaatatcgtcgtcgccatcaccggcgccaacgatgcggcttcgatcgtcgtcgat
gcgacggtcaccgacgaccgggcgacggtcgaggcgggggcggccggcagcggcgatccg
agtgcctccggcaagctgacggtcagcgatgtcgacggcggcgaggcggtgtttgccgcc
ccggcctcactcaacggcatctatggcagcttcaccttcgatgccgccagcggcagctgg
agctatacgctcgacaataaccgggcggcgacgcaggcgctcaaccagggtgacgcggtc
agcgacacgctgagcgtcagctcgctcgacggcaccgccagccataatatcgtcgtcgcc
atcaccggcgccaacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgaccgg
gcgacggtcgaggcgggggcggccggcagcggcgatccgagtgcctccggcaagctggcg
gtcagcgatgttgacgacggcgaggcggtgtttgccgccccggcctcactcaacggcatc
tatggcagcttcaccttcgatgccgccagcggcagctggagctatatgctcgacaataac
cgggcggcgacgcaggcgctcaaccagggcgacgcggtcagcgacacgctgagcgtcagc
tcgctcgacggcaccgccagccacaatatcgtcgtcgccatcaccggcgccaacgatgcg
gcttcgatcgtcgtcgatgcgacggtcaccgacgaccgggcgacggtcgaggcgggggcg
gccggcagcggcgatccgagtgcctccggcaagctggcggtcagcgatgtcgacggcggc
gaggcggtgtttgccgccccggcctcactcaacggcatctatggcagcttcaccttcgat
gccgccagcggcagctggagctatatgctcgacaataaccgggcggcgacgcaggcgctc
aaccagggcgacgcggtcagcgacacgctgagcgtcagctcgctcgacggcaccgccagc
cacaatatcgtcgtcgccatcaccggcgccaacgatgcggcttcgatcgtcgtcgatgcg
acggtcaccgacgaccgggcgacggtcgaggcgggggcggccggcagcggcgatccgagt
gcctccggcaagctggcggtcagcgatgttgacgacggcgaggcggtgtttgccgccccg
gcctcactcaacggcatctatggcagcttcaccttcaacgccgccagcggcagctggagc
tatacgctcgacaataaccgggcggcgacgcaggcgctcaaccagggcgacgcggtcagc
gatacgctgagcgtcagctcgctcgacggcaccgccagccacaatatcgtcgtcgccatc
accggcgccaacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgaccgggcg
acggtcgaggcgggggcggccggcagcggcgatccgagtgcctccggcaagctggcggtc
agcgatgtcgacgacggcgaggcggtgtttgccgccccggcctcactcaacggcatctat
ggcagcttcaccttcgatgccgccagcggcagctggagctatatgctcgacaataaccgg
gcggcgacgcaggcgctcaaccagggcgacgcggtcagcgatacgctgagcgtcagctcg
ctcgacggcaccgccagctacaatatcgtcgtcgccatcaccggcgcagatgatggacca
gctcggcaggcaccaaccgacattaagctgacgccggtcgttccggcagacaatgtcaac
ttcaatagtttcgagttcagtggtctgctgtcggcgactgatcccgacacgggcggattc
agctttaacattgcttcgcagtcgaatccgggcttgttctcgataaccggcaatacgctc
agttcgaatgcgctatcgacgaacggtacattttcagtgacggtaacggcaacgcagacc
ggcgatcctatagggccggccttcgaaaagaccgagacattcacgattatcaccggtggc
aatggcaattcggtggacaatccgaccggtggaacgggcgacgatgtgctctacggcggt
ggcggtaacgatatgatgttcgggctgggaggtgacgacactcttttcggccaagacggc
aacgacaccctaaacggtggtgttggcaacaacaccctgaccgggggcgtgggagatgat
accttctttttccaaaagtttaccaccaccacaaaccatatgaccgacttcaatgctggg
acgaatagcacagccgtggataagttccagttggacgtcggaggcggcacgttcgagttc
gccgtcggcaacaacaatacaagcgtggacaatgtgaaggtaggaaacaacggcacgatc
aatgttgccggaacggagattggcatcaaaacggacgtgagcgtcacgaacgcgaccgtc
cagagcaccatcaatggttacagcaacataaccacaggggcattgttcgtgttccacaat
acggatctcggccatgtggcggtctactacgatcagaacccaagttcagccggcggcgcg
gtgctggtcgctgaattcgacaacatcacgaccctcggcgggcttgccaatttcaactcg
ggcgacttcttgtttggctga
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