Rhizobium etli CFN 42: RHE_CH02833
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Entry
RHE_CH02833 CDS
T00317
Name
(GenBank) probable DNA polymerase III, epsilon subunit protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03030
DNA replication
ret03430
Mismatch repair
ret03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHE_CH02833
03430 Mismatch repair
RHE_CH02833
03440 Homologous recombination
RHE_CH02833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ret03032
]
RHE_CH02833
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH02833
Enzymes [BR:
ret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHE_CH02833
DNA replication proteins [BR:
ret03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHE_CH02833
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHE_CH02833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Dit_C
Motif
Other DBs
NCBI-ProteinID:
ABC91601
UniProt:
Q2K6D5
LinkDB
All DBs
Position
complement(2955650..2956240)
Genome browser
AA seq
196 aa
AA seq
DB search
MKTIAIDFETANEQRGSACSVGLAWIEEGRVTRVEERLIRPRDMRFSGMNIAIHGIRPEH
VEDAPEFPEVMDEFHEDISGATMIAHNAAFDFSVWRASLDLYRQSYPELTYLCSLKMAQR
IWPHFLSHRLNLIAEHLGLRFMHHNAAEDAAVCAAAAIEMAKAVKAKAVEAIPALIGMTP
GRLTARGYAPCTCRKG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccattgctattgatttcgagacggcgaacgagcagcgcggcagcgcctgttcc
gtcggccttgcctggatcgaagagggcagggtgacacgcgtcgaggagcggctgatccgg
ccgcgcgacatgcgtttttccgggatgaacatagccattcacggcatccggccggagcat
gtcgaggatgcgcctgagtttcccgaggtgatggacgagttccatgaggatatcagcggc
gcgacgatgatcgcgcacaatgcggccttcgacttcagcgtctggcgggcgagccttgat
ctctaccggcaatcctatcccgaactcacctatctctgcagcctgaagatggcgcagcgg
atttggccgcatttcctttcgcaccggctgaacctgatcgccgaacatctcggcctgcgc
ttcatgcaccacaacgccgccgaggatgcggcggtctgcgccgcagccgccatcgagatg
gcgaaggcggtcaaggcgaaagcggtggaagcgatcccggcgctgatcggcatgacgccg
gggcggctgacggcgcgcggttatgcgccctgcacgtgccggaaaggctga
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