Rhizobium etli CFN 42: RHE_CH02908
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Entry
RHE_CH02908 CDS
T00317
Name
(GenBank) probable spermidine/putrescine ABC transporter, substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH02908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH02908
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHE_CH02908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABC91676
RhizoBase:
RHE_CH02908
UniProt:
Q2K660
LinkDB
All DBs
Position
complement(3043250..3044548)
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AA seq
432 aa
AA seq
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MTTETTSTKTAKGLCRRTLLKTGAAAVGAIAGSGAITGFPTIWAQTNITLRQFGTGVSNI
NAIAEKCKADLGITLEMTATDSDAAAQRAVTQPDSYDIADIEYWIAKKVFPTGVLQPMDV
KKLKYYDKIVPLFINGKMKPDSVIAQGTAPHTVGFVEAQGAKKFAKEPTQWMTMVPTIYN
ADTLGIRPDLVGRDITSWADIMDPKFKGKTSILNIPSIGIMDAAMIMEALGNIKYADKGN
MTKEEIDKTIEFLIKAKGDGQFRAFWKSFDESVNLMASGEVVIQSMWSPAVAAVRSKGIA
CKYQPLKEGYRAWGGGLGLASHLKGAQLDAAYEYINWYTSGWVGGYLNRQGYYSACMETA
KNFMTADEWGYWIEGKPAQGDILSPEGKVMEKAGAVRDGGAFEARMGAVACWNSVMDEDR
YMVRRWNEFIAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaaacgacatcgacgaagactgcgaagggcctatgccgccgtacgctcttg
aagacgggtgctgccgccgttggcgccatcgccggctccggagcgatcaccggctttccc
acaatttgggcgcagacgaacatcacgcttcgccagttcggcaccggcgtttcgaacatc
aacgccatcgccgagaagtgcaaggccgacctcggcatcacgctggagatgacggcgacc
gattccgacgccgccgctcagcgtgccgtcacccagcccgacagctacgacatcgccgac
atcgaatactggatcgccaagaaggtgtttccgacaggcgtgctgcagccgatggacgtc
aagaagctgaaatattacgacaagatcgtgccgctcttcatcaacggcaagatgaagccg
gacagcgtcatcgcccagggcaccgcaccgcacacggtcggcttcgtcgaggcgcagggc
gccaagaaattcgccaaggagccgacgcagtggatgacgatggttcccaccatctacaat
gccgatacgctcggcatccgtcccgatctcgtcggccgcgacattacgagctgggccgac
atcatggatccgaagttcaagggcaagacctcgatcctcaacattccgtcgatcggcatc
atggatgcggcgatgatcatggaagccttgggcaacatcaaatatgccgacaagggcaat
atgaccaaggaagagatcgacaagacgatcgaattcctcatcaaggccaagggcgacggc
cagttccgcgccttctggaagtcgttcgacgagtcggtcaacctgatggcgtcgggcgag
gtcgtcatccagtcgatgtggtcgccggccgtcgccgccgtccgctccaagggcatcgcc
tgcaaataccagccgctcaaggaaggctaccgcgcctggggcggcggcctcggcctcgcc
tcgcacctcaagggcgcacagctcgatgcggcttacgaatatatcaactggtatacgtcg
ggctgggtcggcggttatctcaaccgccaaggctactattccgcctgcatggaaaccgcc
aagaacttcatgacggcagacgaatggggctattggatcgagggcaagccggctcagggc
gatatcctctctcccgaaggcaaagtcatggagaaggccggtgcggtgcgcgacggcggc
gccttcgaggcccgcatgggtgcggtcgcctgctggaactcggtcatggacgaagaccgc
tacatggtccgccgctggaacgagttcatcgcggcctga
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