Rhizobium etli CFN 42: RHE_CH02915
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Entry
RHE_CH02915 CDS
T00317
Symbol
cinRch
Name
(GenBank) autoinducer transcriptional regulator protein
KO
K20252
LuxR family transcriptional regulator, quorum-sensing system regulator CinR
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH02915 (cinRch)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ret03000
]
RHE_CH02915 (cinRch)
Transcription factors [BR:
ret03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RHE_CH02915 (cinRch)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Gemini_AL1_M
HTH_23
Sigma70_r4
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABC91683
RhizoBase:
RHE_CH02915
UniProt:
Q2K653
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All DBs
Position
3049275..3050057
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AA seq
260 aa
AA seq
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MPCIYDGPHGRIEGTGTMEMIENSYSDKFEPAFEQIKAATNVDAAIRILQAEYGLDFVTY
HLAQTIASKIDSPFVRTTYPDAWVSRYLLNSYVKVDPIVKQGFERQLPFDWSEVEPTPEA
YAMLVDAQKHGIGGNGYSIPVADKAQRRALLSLNARIPADEWSELVRRCRNEWIEIAHLI
HRKAVYELHGENDPVPTLSPREIECLHWTALGKDYKDISVILGISEHTTRDYLKTARFKL
GCATISAAASRAVQLRIINP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtatttatgacggtcctcacggtaggattgagggaactgggacaatggaaatg
atcgagaatagctacagcgacaagttcgaacctgctttcgaacagatcaaggctgcaacc
aatgtggatgccgccatccgtattctccaggcggaatatggcctcgatttcgttacctac
catctcgcccagacgatcgcgagcaagatcgattcccccttcgtgcgcaccacctatccg
gatgcctgggtctcccgctacctgttgaacagctatgtgaaagtcgatccgatcgtcaag
cagggcttcgagcgccagctgcccttcgactggagcgaggtcgagccgacgcccgaagcc
tatgccatgctggtcgacgcccagaagcacggcatcggcggcaacggctattccattccc
gtcgccgacaaggcgcagcgccgcgcgctcttgtcgctgaacgcccgcatcccggccgac
gaatggtccgagcttgtgcgccgctgccgcaacgaatggatcgagatcgcccatctgatc
caccgcaaggccgtctatgaactgcatggcgagaatgatccggtgccgaccttatcaccg
cgcgagatcgagtgcctgcactggacggcgctcggcaaggattacaaggatatctcggtg
atattgggaatatcggagcacacgacgcgcgattacctgaaaacggcacgcttcaagctc
ggctgcgccacgatttcggcggccgcttcgcgggcggtgcagctgcgcatcatcaatccc
tga
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