Rhizobium etli CFN 42: RHE_CH02960
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Entry
RHE_CH02960 CDS
T00317
Name
(GenBank) probable amino acid ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH02960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH02960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH02960
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RHE_CH02960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
PIF2
LytR_C
Motif
Other DBs
NCBI-ProteinID:
ABC91727
RhizoBase:
RHE_CH02960
UniProt:
Q2K609
LinkDB
All DBs
Position
complement(3094268..3095365)
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AA seq
365 aa
AA seq
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MRSSITAAIVALVVSLGSLARAEILIGAAGPVTGPLAWIGEQMQRGTEMAVADINATGGV
LGQQVQLITVDDFCDPEQAVAAAQKLVADGVVLVVGHYCSQASIPASKVYEAAGILQISP
GSTNPLLTEQGRANVFRVIGRDDAQGVVAGNYLADHWGDKKIAILHDNTTYGKGLADETR
KQLNKRGVTEAIYEAFTPGKNDYTAEISALEGAGIAVLYVGGYLPEVALMVRASRDRAYA
LQLVSGDGMASEDFALIAGSAAEGTLFTFSADPRRVPQAAQVVERFRAENFEPAGYTLLS
YSAVQVWSQAVKKAGSLRPQEVIASMQGNQFETAMGRVDFDDKGDLTVQSWIWYVWKGGE
YVPLE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcagcatcactgcagctattgtcgcgctcgtcgtttcgcttggcagtctggcg
cgggcggagatcctgatcggagcagcaggcccggtcacaggaccgctcgcgtggatcggg
gagcagatgcagcgcggcacagagatggcagtggccgacatcaatgcgactggcggcgtg
ctcgggcagcaggtgcaactcatcacggtcgacgacttttgcgatcccgagcaggctgtg
gcggccgcccagaaactggtggctgacggtgtggtgctcgtcgtcgggcattactgttcc
caggcctcgatcccggcatccaaggtgtacgaggccgcgggaattctacagatttcaccc
ggttcgaccaatccgctgttgaccgaacaaggccgtgcaaatgttttccgcgtcattggt
cgcgacgacgcgcagggggtggtagccggcaactatctggccgatcattggggtgacaag
aaaatagcgatccttcacgacaacaccacctatgggaaggggctcgccgacgagaccaga
aagcagttgaataagcggggtgtcaccgaagcgatctacgaagccttcacccccgggaag
aacgactatacagccgagatctcggcgttagagggcgccggcatcgccgtgttgtatgtt
ggtgggtatctgcccgaggtcgcgcttatggttcgcgcttcacgagaccgcgcctacgca
cttcaactcgtatcaggcgatggcatggcgagcgaggactttgcactgatcgccggatct
gccgccgagggtacgctcttcacgtttagcgcggacccacggcgcgtccctcaggcggct
caagtggtcgagcgtttccgtgccgagaatttcgagcccgcaggctacacactgctcagt
tactccgccgtccaggtctggtcgcaggcggtgaagaaggccggttctctaaggccgcag
gaggtgatcgcctcaatgcaaggtaatcaattcgaaacggcaatgggccgggtcgatttc
gacgacaagggcgacctcaccgttcaaagctggatatggtatgtctggaagggtggcgaa
tacgtgccgctggaatag
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