Rhizobium etli CFN 42: RHE_CH03096
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Entry
RHE_CH03096 CDS
T00317
Symbol
oppA
Name
(GenBank) oligopeptide ABC transporter, substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret01501
beta-Lactam resistance
ret02010
ABC transporters
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH03096 (oppA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH03096 (oppA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RHE_CH03096 (oppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03096 (oppA)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RHE_CH03096 (oppA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
LPD18
Motif
Other DBs
NCBI-ProteinID:
ABC91862
UniProt:
Q2K5M4
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All DBs
Position
3242751..3244331
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AA seq
526 aa
AA seq
DB search
MNQFTKKFLASAVLGTLLAFSAQAATLNIHNGGDPQSLDPQKLSGDWENRIAGDIFEGLV
TEDAKDNPIPGQAESWTISPDGKVYTFKLRDGIKWSDGQPVTAGDFVFALQRLVDPKNAA
DYAYLQFTIKNAEKINKGEITDLNQLGVKAIDDKTLEITLENPTPYFLNALMHYTAYPLP
KHVVEAKGQDWVKIGNIVTNGPYKPVEWVPGSHVTTVKNDQWYGTKDLKIDGAKFFVLED
QEAALKRYRAGEFDILTDFPTDQYEWMKKNLPSQAHVAPFSGLYYYVVNSQKPPFSDKRV
RQALSMAINREVIGPQILGTGELPAYSWVPPGTANYGEPAYVSWKDLPYKDKVAEAKKLL
ADAGFGPDKPLHAVLSYNTNDNHKRIAVAIASMWKPLGVDVELVNAETKVHYDQMQRGQV
EIGRAGWLADYNDPDNFLNLLVTGVQMNYGRWSNPDYDKMIKDGNAETDLKKRAEIFKKA
EQLALDESAALPIYYYVSKNVVSPKVEGFVDNIQDIHRTRWLSMKE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcacgaaaaaatttctcgcctccgcagtgcttggcacattgctggcgttt
tcggcgcaagcggcgacgctcaacatccacaatggtggcgatccgcaatcgctcgatccg
cagaaactttccggtgactgggagaaccggatcgccggcgacattttcgaaggcctcgtc
accgaagatgccaaggacaatccaattcccggccaggccgaaagctggaccatctcgcct
gacggcaaggtctacacgttcaagcttcgcgacggcatcaagtggtccgatggccagccg
gtcacggcaggagacttcgtcttcgccttgcagcgcctcgtcgacccgaagaacgccgcc
gactacgcctatctgcagttcaccatcaagaacgccgaaaagatcaacaagggtgagatt
accgacctcaatcagctcggcgtcaaagcgatcgacgacaagacgctcgaaatcacgctt
gagaacccgaccccctatttcctcaacgccctgatgcactacaccgcctatccgctgccg
aaacatgtcgtcgaggcgaagggccaggattgggtcaagatcggcaacatcgtcaccaac
ggcccctataagccggtcgaatgggtccccggctcgcatgtcaccacggtcaagaacgac
cagtggtacggcaccaaggacctgaagatcgacggcgccaagttcttcgtgctcgaagat
caggaagcggcgctgaagcgctaccgcgccggcgaattcgatatcctcaccgacttcccg
accgaccagtacgaatggatgaagaagaacctgccgtcccaggcgcatgtcgccccattc
tccggcctttattattacgtcgtcaactcgcagaagcctcctttcagcgacaagcgcgtc
cgccaggctctctccatggcgatcaaccgcgaagtgatcggcccgcagatcctcggcacc
ggcgagctgccggcctattcctgggttccgccaggcactgccaattacggcgagccggcc
tatgtcagctggaaggacctgccttacaaggacaaggtcgccgaggccaagaagctgctt
gccgacgccggattcggcccagataagccgctccacgcggtcctcagctacaataccaat
gacaaccacaagcgcatcgccgtcgcgatcgcttccatgtggaagccgctcggcgtcgat
gtcgagctcgtcaatgccgaaaccaaggtgcattacgaccagatgcagcgcggccaggtg
gaaatcggccgtgccggctggctcgccgattacaatgacccggacaacttcctgaacctg
ctggtgacaggcgtccagatgaactacggccgctggtcgaatcccgattacgacaagatg
atcaaggacggcaacgccgaaaccgacctgaagaagcgcgccgaaatcttcaagaaggcc
gagcagctggcgctggatgaatccgccgccttgccgatctactattacgtctcgaagaat
gtcgtctccccgaaggtcgaaggcttcgtcgacaacatccaggacatccaccgcacgcgc
tggctgtcgatgaaagagtaa
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