Rhizobium etli CFN 42: RHE_CH03235
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Entry
RHE_CH03235 CDS
T00317
Symbol
pssN
Name
(GenBank) exopolysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RHE_CH03235 (pssN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03235 (pssN)
Transporters [BR:
ret02000
]
Other transporters
Pores ion channels [TC:
1
]
RHE_CH03235 (pssN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB
Poly_export
Motif
Other DBs
NCBI-ProteinID:
ABC91999
RhizoBase:
RHE_CH03235
UniProt:
Q2K587
LinkDB
All DBs
Position
complement(3400310..3401521)
Genome browser
AA seq
403 aa
AA seq
DB search
MGCFPVGSTRVAIVVALTSILASCTSLPRSGPDHKDVDRGAAVKVTTKERRVGIDYALVD
LSKNVLSYFTSPQPTSFKGFGGGRGGAPEIPLGYGDVVEVAIFEAQSGGLFIPSDAGSRP
GNYISLPAQTIDRNGTITIPYAGRVPAAGRLKETVEQDVEDRLASRAIEPQVVITTTTNR
SSQVAVLGDVNNPQRVQISPAGERILDVISAAGGLTTNNIETNVTLQRRGRTATVAYNTL
LKNPAENIYVAPDDTISVDHERRTFLALGAAGVSGRFDFEESDLTLGEAIAKAGGLRDDR
ADPAQVLLYRLVPRKTLAAMHVDTTRFAGDTVPVIIRANLRDPATLFAAQQFKMEDKDII
YISNSDSIELVKFLDIVNSVSSTVAGVTDDARDTRSAVRELGR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggttgttttcctgtcggtagtacacgcgtcgccattgttgtagcgctaacgagtata
ttggcaagctgcacgtccttgccaagatccggtccagatcacaaagatgtcgatcgaggg
gcggcggtaaaggtaacaacgaaggagcgtcgcgtcggtatcgactacgccctggttgat
ctaagcaagaacgttctgtcctatttcacctctccgcagccgacctccttcaagggtttt
ggcggtgggcgcggcggtgcgcctgaaattccgctcggttatggcgatgtcgtcgaggtt
gcgattttcgaagctcagtccggcggtctcttcattccctccgacgccggtagccggccc
ggcaattatatctctctgccggcgcagaccatcgatagaaacggaacgatcacgatcccc
tatgcgggtcgcgttccggctgccggtcgtctgaaggagaccgttgagcaggatgtcgag
gatcgtctggccagtcgcgcaatcgagccgcaggtggttatcaccacgacgaccaaccgc
tccagtcaggtggcagtgctgggtgacgtcaacaatcctcagcgcgttcagatcagtccg
gccggtgagcgcattctcgacgttatttctgccgcgggcggtttgacgaccaataacatc
gaaacgaatgtgacgctgcagcgccgcggcagaacggcgaccgtcgcctacaatacgctg
ttgaaaaatccggcggagaacatctatgtcgcgccggatgatacgatctcggtcgatcat
gagcgccgcaccttcctggcgctcggcgccgccggcgtcagcggccggttcgatttcgaa
gagtcggatctgactctcggagaggccatcgcgaaggcgggcggcttgcgcgacgaccgt
gcggatccagcccaggtcctgctctatcgccttgtcccgaggaagactcttgcggcgatg
catgtagatacgacgcggtttgcgggcgatacggttccggtgattatccgcgccaatctc
cgtgatccggcaaccctgtttgccgctcagcaattcaagatggaagacaaggatattatc
tatatttccaattcggactctatcgaattggtcaagttccttgacatcgtaaactcggta
tcgtccactgttgccggcgtgacggacgacgcacgcgatacccgtagtgcggtgcgagag
ctcgggcgctga
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