Rhizobium etli CFN 42: RHE_CH03242
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Entry
RHE_CH03242 CDS
T00317
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHE_CH03242 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH03242 (ung)
Enzymes [BR:
ret01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHE_CH03242 (ung)
DNA repair and recombination proteins [BR:
ret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHE_CH03242 (ung)
Prokaryotic type
RHE_CH03242 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABC92006
UniProt:
Q2K580
LinkDB
All DBs
Position
complement(3409477..3410106)
Genome browser
AA seq
209 aa
AA seq
DB search
MQQLKSFLVAQKRVGKRIFPKGSEYFRALDLTPIANVKAVILGQDPYHGLGQAHGLCFSV
RPGVRIPPSLVNIYKEMETDLGIAPARHGFLEHWARQGVLLLNSVLTVEEGQAAAHQGKG
WERFTDAIIGKVNDECESVVFMLWGSYAQRKAAFVDTARHLVLKAPHPSPLSAHNGFFGC
KHFSKANAFLQSRGRPPIDWQLPADPHGG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaactcaaatccttcctcgtcgcgcagaaacgagtgggcaagcggatcttcccg
aagggcagcgaatatttccgcgctctcgatctgaccccgattgccaacgtcaaggccgtc
atcctcggacaggatccctatcacgggcttgggcaggcgcatggactatgcttcagcgtc
cgacctggcgtgcgcataccaccctcgctcgtcaatatctacaaggagatggagacggat
ctcggcatagcgccagcgcgccatggttttctcgaacattgggcaaggcagggcgtgctc
ctgctgaacagcgtgctgacggtcgaggaagggcaagcggccgcccatcagggcaagggg
tgggagcgcttcactgatgcgattatcggcaaagtcaatgacgaatgcgaatccgtcgtc
ttcatgctctggggctcctatgcccagcgcaaggccgcatttgtcgatacggcgcggcat
ctggtgctcaaggcgccgcatccctcgccgctttcggcccataacggcttctttggctgc
aaacatttttccaaggcgaatgccttcctccagtcccgcgggcggccgccgatcgactgg
caattaccggcagatcctcacggcggctga
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