Rhizobium etli CFN 42: RHE_CH03416
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Entry
RHE_CH03416 CDS
T00317
Symbol
potB
Name
(GenBank) spermidine/putrescine ABC transporter, permease component I protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH03416 (potB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03416 (potB)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHE_CH03416 (potB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-ProteinID:
ABC92173
RhizoBase:
RHE_CH03416
UniProt:
Q2K4R3
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All DBs
Position
3592914..3593741
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AA seq
275 aa
AA seq
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MFQNRAEALALALPAAVFATVVFLLPVAILLSEGFRAGGAWTLSAYTGFFSETLNRTVFL
RSFRLAIEVTAVSAVIGYAAAFAIVNLPANGKGRMVGLVTLPLMISPVARTYAWIVILGR
TGIVNQAITGLGFSADPLRLLFTETAVFIGLLQLFLPLMILSLISALENMPKDAIPAARV
LGANWFQVFWKVVLPLTREGLVVGGTLVFTGSLTAYITPAVLGGSKVLMLETLMYQQVSV
ANDFVSASVIAFILIVMSFAANILLKRLATARSRR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaaccgcgcggaagccctggcgcttgccctgccggcagccgtctttgcgaca
gtggtcttcctgctgcccgtcgcaatcctgctgtcggagggttttcgtgccggcggcgcc
tggacgctgtcggcctacacgggcttcttttccgagacgctgaaccgcaccgttttcctg
cgctcctttcggctcgccatcgaagtcaccgccgtctcggccgtcatcggctacgccgca
gcctttgccatcgtcaacctgccggcgaacggcaaaggccgcatggtcggcttggtcacc
ctgccgctgatgatctcgccggtggcgcgcacctatgcgtggatcgtcattctcggccgc
accggcatcgtcaaccaggcaataacgggtctcggtttcagcgccgacccgctgcgcctg
cttttcaccgaaaccgccgtcttcatcggcctgctgcaactcttcctgccgctgatgatc
ctgtcgctgatcagcgcgctggaaaacatgccgaaggatgcgatccccgccgcccgtgtg
cttggcgccaactggttccaggtcttctggaaggtcgtcctgccgctgacgcgtgaaggg
ctcgtcgtcggcggtaccctcgtcttcaccggctcattgacggcttatatcacacccgcc
gtacttggcggttccaaggtgctgatgctcgaaacgctgatgtaccagcaggtttccgtc
gccaatgatttcgtctcggcaagcgtcatcgccttcattctgatcgtcatgagctttgcc
gccaatatcctgctgaaacggctagcgaccgcgaggagccgcagatga
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