Rhizobium etli CFN 42: RHE_CH03487
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Entry
RHE_CH03487 CDS
T00317
Name
(GenBank) probable small-conductance mechanosensitive channel transmembrane protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03487
Transporters [BR:
ret02000
]
Other transporters
Pores ion channels [TC:
1
]
RHE_CH03487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Trp_oprn_chp
Sema4F_C
Motif
Other DBs
NCBI-ProteinID:
ABC92243
RhizoBase:
RHE_CH03487
UniProt:
Q2K4J3
LinkDB
All DBs
Position
complement(3673370..3675517)
Genome browser
AA seq
715 aa
AA seq
DB search
MQASTLRWRAVVKRDRAGGLTAAISGILAFIALLSVAWPSFAQTQPAQAPAVASPPAQVR
EMMQLMQTPEVKQWMSTQMAATSAGDTAAENQMSVLSGLLQHSRRHVSMVSDAAMTLPLQ
IGNASSLLFGEIAATGRVRMIVQYLAIFLLGAIVESIARYAFRRRRRRLAAMAGMHLAPR
VIPALIFAAATVLTLLSLNWPPLSQSIAIVCVVALIVQRFTICLGGVLVDLIGLSRAEEE
RQGVSAPIMPGRSVALFWYRRCAIFVIYFAFGWAVIQSMAPLGYTPSARLLVGYILGIGL
LLIAVEAVWSRPHKDEKRGYGISWALTIYFLLLWGLWVAGFNGLLWLGIYVLLLPRVLAV
STLAVKSLQQTEASFLASRRIATVLLDRGVRALIIAFAAIWLGRMLGVGADTMAAGDRMT
DKIARGVIGGIVILLAADLLWHVVKAYIDGKLLDSPLDVTATDEEKAKHARIQTLLPIFR
NILAVVIAVIAVLMVLSGLGIEIGPLIAGAGVVGVAVGFGAQTIVKDVISGMFYLWDDAF
RVGEYIESGSHKGVVEAFSLRSVKLRHHRGPLTTVPFGELGAVKNLNRDWTIDKISLNVK
YDTDLVKAKKVIKQIGQTLLENPEFGPHIIETLKMKGVEQFGEFAIEIRLSMMTKPGEQF
VIRRNALAMIRNAFKENGIEFAVPTVQVAGDREADLEAAVARYASHMRANGEPAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggcgtcgacacttcgttggagggcggtcgtgaagcgtgacagggcaggaggcttg
acggccgccatatcaggcatattggcattcattgcgcttctttccgtggcttggcccagc
tttgcccagacgcagccggcacaagcgccggccgtggctagcccgccggcgcaggtgcgc
gagatgatgcagctcatgcagacgcccgaggtcaagcaatggatgtcgacccagatggcg
gcgacatctgcgggcgatacagcggcggaaaaccagatgtccgtcttgtcgggtttgctc
cagcattcccgtcgtcatgtctcgatggtttccgatgccgcgatgacgctgcccttgcag
atcggcaatgcatcctcgctgcttttcggtgaaatcgccgccactgggcgggttcgcatg
atcgtccaatacctggcgatctttctgctgggcgcgatcgtcgaaagcattgcccgctat
gccttccgccgccgccgtcgccgtctggctgcgatggcaggcatgcatctggcgccacgc
gtcatcccggcgctgatcttcgcggcggcgacagtgctgacgcttctcagtctcaattgg
ccgccgctcagccagagtatcgcgatcgtctgtgtcgttgcgctgatcgtccagcgtttt
acaatctgcctcggcggtgtgctggtcgatctcatcggactctcgcgagccgaggaggag
cggcagggtgtctccgctccaatcatgccgggacgctccgtcgcgctcttctggtatcgc
cgttgcgcgatcttcgttatctatttcgctttcggctgggcagtgatccagtcgatggcg
ccgctcggctatacaccgagcgctcggcttctcgtcggctacatcctcggtatcggcctg
ctgctgatcgcggtcgaggcggtctggtcgcggccgcataaggacgagaagcgtggttat
ggaatctcctgggcactcaccatttatttcctgctgctttggggactgtgggtcgcgggc
ttcaacgggctgctctggctcggcatctatgtgctgctgctgccgcgcgtgctcgcggtt
tcgacgcttgcggtgaaatcgctgcagcagaccgaagcgagcttccttgccagtcgccgt
atcgcgacagtgctgctcgaccgtggcgtgcgggcgctgattatcgcctttgccgccatc
tggctcgggcggatgctcggcgtcggcgccgatacgatggctgctggcgatcggatgact
gacaagatcgcgcggggggtcatcggcgggattgtcatcctgctcgctgctgatttgctc
tggcacgtcgtcaaggcctatatcgacggcaagctgctcgattcacccctggacgttacc
gcgacggacgaggagaaggccaaacatgcgcggatccagacgctgctgccgatcttccgc
aatatcctcgccgtcgtgatcgcggtcatcgccgttctgatggtgctctcgggcctcggt
atcgagatcgggccgctgatcgcgggtgccggcgtcgtcggcgttgcggtgggcttcggc
gcccagacgatcgtcaaggatgtcatcagcggcatgttctacctctgggacgatgctttc
cgtgtcggcgaatatatcgaaagcggcagccacaagggtgtcgtcgaagcgttcagcctg
cgatcggtgaagctcaggcatcatcgcgggccgttgacgaccgtgccgttcggcgaactc
ggcgcggtgaagaacttgaatcgcgactggacgatcgacaagatcagcctcaacgtcaaa
tacgacaccgatctcgtcaaggccaagaaggtgatcaagcagatcggccagacgttgctc
gaaaacccggaattcggcccgcacatcatcgagacgctgaagatgaagggtgtcgagcag
ttcggcgaattcgcgattgagatccggctgtcgatgatgacgaagcccggcgagcaattc
gtcatccgacgcaatgcactggcaatgatccgcaacgccttcaaggaaaacggcatcgag
ttcgccgtgccgacggtgcaggtggcgggcgatcgcgaggccgatttggaggctgccgtc
gcgcgttatgcttctcatatgcgagccaacggcgaaccggctgcatga
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