Rhizobium etli CFN 42: RHE_CH03657
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Entry
RHE_CH03657 CDS
T00317
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RHE_CH03657 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ret01007
]
RHE_CH03657 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ret03016
]
RHE_CH03657 (lysS)
Enzymes [BR:
ret01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RHE_CH03657 (lysS)
Amino acid related enzymes [BR:
ret01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RHE_CH03657 (lysS)
Transfer RNA biogenesis [BR:
ret03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RHE_CH03657 (lysS)
Prokaryotic type
Other AARSs
RHE_CH03657 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABC92412
UniProt:
Q2K424
LinkDB
All DBs
Position
3872861..3874357
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AA seq
498 aa
AA seq
DB search
MADNKTENTLSSDATEVRAQKLKLLREQIGDVYPAHFHRSLTNAELATRYEGLDPDVETQ
DIVTVAGRVYSSRNSGMFMDIHDASGKIQIFSHKDVTGEEARALLPMIDIGDIIGVTGIV
RRTKRGELTINAQKIEMLTKSLLPMPEKWHGLSDIELRYRKRHLDILTNEDSKLRFQQRS
KIVSGIRRFMENDGFMEVETPMLQSIYGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDMMDLVERLFETLALSIHG
TTEFDFGDKRLSFKGPFKRVPMPDAVKEVTGIDFLAIKTDEEARAAAKAAGFAVEKDWTW
GECLAFIFEEKVEATLIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFS
ELNDPEEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTN
APSIRDVILFPARRSKAD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacaacaagaccgaaaacaccctttcctccgacgcgaccgaggtgcgcgcccag
aagctgaagctgctgcgcgagcagatcggcgatgtctatccggcgcattttcaccggagc
ctgaccaatgccgagcttgcgacgagatacgagggtctggaccccgatgtcgagacgcag
gacatcgtcaccgtcgctggccgggtctattcctcgcgcaactcgggcatgttcatggat
attcatgacgcctccggcaagatccagatcttttcgcataaggacgtgacaggcgaggaa
gcccgcgccctgctgccgatgatcgacattggcgacatcatcggcgtcaccggcatcgtg
cgccgcaccaagcgcggtgaactgacgatcaacgcccagaagatcgagatgctgaccaag
tcgctgctgccgatgccggagaagtggcacggcctttccgacatcgagctgcgctaccgc
aagcgccatctcgatattttgaccaacgaggattcgaagctgcgcttccagcagcgctcg
aagatcgtctccggcatccgccgcttcatggaaaatgacggcttcatggaagtcgagacg
ccgatgctgcagtcgatctatggcggcgccaccgccgagccgttcaagacgcatcacaac
acgctgaagctcgacatgtacctgcgcattgcgccggaactgttcttgaagcgcacgctg
gtctccggcctcaccgacaaggtgtttgaaatcaaccgcaacttccgcaacgaaggcgtc
tccacccggcacaatccggaattcaccatgatggagtgctactgggcctatgcggattac
gaggacatgatggacctcgtcgagcgtctgttcgagaccttggctctctccattcacggc
acgacggaattcgacttcggcgacaagcggctgtccttcaagggaccattcaagcgcgtg
ccgatgcccgacgccgtcaaggaagtaaccggcatcgatttcctcgccatcaagaccgat
gaggaagcgcgcgccgcggccaaggctgccggctttgcagtcgagaaggattggacctgg
ggcgagtgcctcgccttcatcttcgaggaaaaggtcgaagccacgctgattcagccgtct
cacgtcacccatttcccgaaggacatttcgcccttcgccaaggaagtgccgggcgagccg
cgcctcgtcgagcgcttcgagacctattgcaacgcctgggaactcggcaacgccttctcg
gaactcaacgatcccgaggagcagcggcgccgcatggtcgagcagctcgaacaggcgcat
gcccgcggcgaaaaggaaaagcagctggacgaggaattcctcgacgcaatcgaccagggc
atgccgccggccggcggcctcggcatcggcgtcgaccgtctgatcatgctgctgaccaac
gctccgtcgatccgcgacgtcattctcttcccggcccgccgcagcaaggctgactaa
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