Rhizobium etli CFN 42: RHE_CH03660
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Entry
RHE_CH03660 CDS
T00317
Name
(GenBank) putative spermidine/putrescine ABC transporter, substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH03660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03660
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHE_CH03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
ABC92415
RhizoBase:
RHE_CH03660
UniProt:
Q2K421
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All DBs
Position
3876377..3877537
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AA seq
386 aa
AA seq
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MTNLLKSCTAALACLGFATQGIAAEPLKALGKGEGAVSIVAWAGYIERGETDKNYDWVTD
FEKETGCKVSVKTAATSDEMVSLMNEGGFDLVTASGDASLRLIAGKRVQPINTDLIPSFK
NVDKRLQDGPWYTVGGVHYGVPYLWGPNVLMYNTDAFKDKAPTSWGVVFEEQTLPDGKSN
KGRVQAYDGAIYIADAAMYLMAHKPDLGIKDPYELTEDQYKAALDLLRGQRKLVSRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLLQADKQKIASTFPDEGVTGWADTTMLHADSEHPNC
AYMWMEHSLQAKVQGDAAAWFGAVPSVPAACKGNELMGDTGCATNGFDHFDKIKFWKTPV
AKCATQGECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctcttgaaatcctgcacggcagcgctcgcctgcctgggcttcgcgacgcag
gggatcgccgccgagccattgaaggcgctgggcaagggcgagggtgcggtcagcatcgtc
gcctgggccggctatatcgagcgcggcgaaaccgacaagaattacgattgggttaccgac
ttcgaaaaagaaaccggctgcaaggtttccgtcaagaccgccgccacgtccgatgaaatg
gtgtcgctgatgaacgagggcggcttcgatctcgtcaccgcatcgggcgacgcgtcgctc
cgcctcattgccggcaagcgtgtccagccgatcaataccgatctgatcccgagcttcaag
aatgtcgacaagcgcctgcaggacggcccatggtacacggtcggcggcgtgcattacggc
gtgccctatctctggggaccgaatgtgctgatgtacaataccgatgccttcaaagacaag
gcgccgaccagctggggcgtcgtcttcgaggagcagaccctgccggacggcaagtcgaac
aagggccgcgtccaggcctacgacggcgcgatctatatcgccgatgctgccatgtatctg
atggcccacaagccggatctcggcatcaaggacccgtacgaactgaccgaagaccaatac
aaggccgccctcgacctgctgcgcggccagcgcaaactcgtctcgcgctactggcacgac
gcgatgatccagatcgacgacttcaagaacgaaggcgtcgtcgcctccggctcctggccc
ttccaggtcaacctgctgcaggccgacaagcagaagatcgcctccaccttcccggatgaa
ggcgtcaccggctgggccgacacgacaatgctgcacgccgacagcgaacatccgaactgc
gcctacatgtggatggaacattcccttcaggccaaggtccagggcgacgccgccgcctgg
ttcggcgccgtgccctccgttcccgctgcctgcaagggcaatgaactgatgggcgatacc
ggctgcgccaccaacggcttcgatcactttgacaagatcaagttctggaagaccccggtc
gccaaatgcgcaacgcagggcgaatgcgtgccctatcaccgctgggtgtccgattacatc
ggcgtgatcggggggcggtga
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