Rhizobium etli CFN 42: RHE_CH03661
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Entry
RHE_CH03661 CDS
T00317
Name
(GenBank) probable spermidine/putrescine ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH03661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03661
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHE_CH03661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
TOBE_3
AAA_29
sCache_3_2
AAA_16
ABC_ATPase
TniB
Motif
Other DBs
NCBI-ProteinID:
ABC92416
RhizoBase:
RHE_CH03661
UniProt:
Q2K420
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All DBs
Position
3877753..3878739
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AA seq
328 aa
AA seq
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MTSAVRFQQVSRHFGQVRAVDGVDLEIAPGEFFAMLGPSGSGKTTCLRLIAGFEQPTSGH
IQIFGETADGVPPYRRNVNTVFQDYALFPHLNILDNVAYGLMVKGVGKVERTKAAGDALE
LVKLPGYGSRRPNQLSGGQRQRVALARALVNKPKVLLLDEPLGALDLKLREQMQEELKSL
QRALGITFVFVTHDQGEALSMADRVAVFNNGNIVQHGTPRDIYRCPKTRFVADFVGSSNV
IAPDLMAALGGEKRWASLRPEAIRLASDGIEAKVEHASFLGAATRLSVDLRGSRLHVTLP
AGTPVPDIGAGIRLTWQPADIHYMDDAA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagccgtccgtttccaacaggtatcgcgccatttcggccaggtccgcgccgtc
gacggcgtcgatctggaaatcgcgccgggcgagttcttcgccatgctcgggccctccggc
tccggcaagacgacgtgcctcagattgatcgccggtttcgagcagccgacatcaggccac
atccagatcttcggcgagacggccgacggcgttccgccctaccgccgcaacgtcaacacc
gtattccaggattacgcgctcttcccgcacctcaatattctcgacaatgtcgcttacggg
ctgatggtcaaaggcgtcggcaaggtggagcggacgaaggcggcgggcgatgccctcgag
ctcgtcaaactgccgggttatggcagccgccgccctaaccagctctccggcggccagcgg
cagcgcgtggcgctcgcccgcgccctcgtcaataagccgaaagtgctgctgctcgatgag
ccgctcggtgcgctggacctgaagctgcgcgagcagatgcaggaggaattgaagagcctg
cagcgcgcgctcggcatcacctttgtcttcgtcacccacgatcagggcgaggcgctgtcg
atggccgatcgcgtcgcggtcttcaacaatggcaatatcgtccagcacggcacgccgcgg
gatatctaccgctgcccgaagacccgcttcgtcgccgatttcgtcggctcgtccaatgtg
atcgcgcctgatctgatggccgcgctcggcggcgagaaacgctgggcgagcctgcgcccc
gaggcgatccggctggcaagcgacggcatcgaggcgaaggtcgagcatgcgagcttcctc
ggcgccgccacccgtctcagcgtcgatctgaggggcagccggctgcatgtcacgctgccg
gcaggcacgcctgtgccggatatcggcgccggcatccggctcacctggcagcccgccgat
attcactacatggacgatgcggcatga
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