Rhizobium etli CFN 42: RHE_CH03785
Help
Entry
RHE_CH03785 CDS
T00317
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHE_CH03785 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH03785 (alkA)
Enzymes [BR:
ret01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RHE_CH03785 (alkA)
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHE_CH03785 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ABC92533
UniProt:
Q2K3Q3
LinkDB
All DBs
Position
complement(4011844..4012536)
Genome browser
AA seq
230 aa
AA seq
DB search
MLSSATDFSFEPLGGRVQIIRNDDDVRLGLEALLRLDPRLAPIAAEAGPIPLRLREPGFA
GLAHIIVSQMVSRASAEAIWRRMLPADGPLTAEGYVLLAPEAWREFGLSRAKADTLSRVA
EAVASGHLDLSGLCLKPPDEALGELTALKGVGPWTAQVYLMFCGGHADVFPAGDVALQNA
VGAALGLAARPQAKPLARLAEIWSPWRSVAARLFWAYYVTKMRRDMVPIG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttctgccacggatttcagtttcgaaccactgggaggacgcgtgcagatcatc
cgcaacgacgatgacgtcaggctggggctcgaagcattgctgcgtctcgatccgcgcctt
gcaccaatcgcggcggaggcagggcctattccattgcggctgcgcgaacccggttttgcc
ggccttgcccatatcatcgtgtcgcaaatggtctcgcgcgccagcgccgaggcgatctgg
cggcgcatgctgccggcggacgggccgctgacggccgaaggttacgtgctgcttgcaccc
gaggcctggcgggaattcggcctatcgcgcgccaaggccgacacgttgtcgcgggttgcg
gaagccgttgcctccggccacctcgatctttccggtctctgcctgaagccaccggacgaa
gcgcttggcgaactcaccgccttgaagggcgtcggtccatggacggcgcaggtctatctg
atgttctgcggcggccacgccgatgtctttccggccggcgatgtcgcgctgcagaacgcc
gttggcgctgcgcttggacttgcggcgcggccgcaggcaaagccgctcgccaggcttgcg
gaaatctggtcaccatggcgctcggtggcggcccggcttttctgggcctattacgtcacg
aaaatgcggcgcgacatggtgccgatcggctga
DBGET
integrated database retrieval system
