Rhizobium etli CFN 42: RHE_CH03849
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Entry
RHE_CH03849 CDS
T00317
Name
(GenBank) hypothetical conserved protein
KO
K09800
translocation and assembly module TamB
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH03849
Transporters [BR:
ret02000
]
Other transporters
Pores ion channels [TC:
1
]
RHE_CH03849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABC92596
RhizoBase:
RHE_CH03849
UniProt:
Q2K3J0
LinkDB
All DBs
Position
4074287..4080706
Genome browser
AA seq
2139 aa
AA seq
DB search
MQTLAKIVNWVVRVTGYAVGAILVLAVAALAIFGFTSFGARIVTERIASTLSNRDMTIEV
REPEGLLTGGLRAAEISLSDTRGVFAEIHGVAIDWNPLALLTGTFHAKRFQIDTISVLRK
PVRTLPSRPNAENSGGFALPVKVDVDHMALPDIKLAEAFAGRAFALAAEGSLSADGDGGE
AMVNVSRHAVPDARLTADIAYAPAENRLRLKAQLAEPKGGLLAGFLGLPGNPAVNIDLDG
QGPISNWAGKMQAALDGQQRAAIEGRHAISADGLHHLDLKGGGDLSSLLPAAFRPLFAGQ
TNIDVAATFDDRGKIDIQTGNIATGSVVIAASGALDPAGNNSLNANLLGTSGPVDFRWPL
AEGEARFLISGLNLALTGDAQTARLSLSGSLDSATLPQADIGNVKLTAKSDAFNLAARSG
SVQLRLVAGDATFSEPNLNRAVQGPITIASPLQISPGDIGFNGTTVESANINGILNGSYR
LADRALTGNVKLSIEPAALPAAATSRFDRPISLESQVTGTFPSKFALSNLVLKSGTLEAA
GNVAIDGSMLNADLSGRLPDIGKLMTGATGGAGYALRVGGELPAISVTANIKAPSLQMGD
RMVANLNIDLSGVADPKAPQGKFAATGTIDGQPIGINGDIRSENGKTSIPGLTADIGGNR
LTGNLEFSPTLEPTGALTFDFPNIGLLAALGGQKAEGDLKGYLGVESDSGRITLKLLASG
NSIRRDTLAIIKPEIDVTISDLGAFAANGTVKAEALNAGTNSLATLSLGFTKQQDHTDFD
LNAAYDGNPVLAAGNIATTSGAIDLNLDRFSASPRNIPIELAAPTQVTVANGVANLNGLT
LKTGAGSVSVTGSAGETLKLNADIRHLPAALANGFVPTLSAGGTISGTIAVTGTPAAPIA
DFKLHWTDATTGQTKDAGLMPLGITAGGKFADNKLDFATTIGSDDGLSLKAAGKVGLADP
TSPVLDIDADILNLPARIANGFVADLAAEGVITGKATASGSLKAPTANFDLVWKNAATSH
TKRAGLAGLEVTASGKFADNRLNFDAAVSGADNLSLKASGNVGIIGTTIGEVKVDAILAN
APAGLANGFVPDLAAEGTVSGTVSASGSLAAPTADFDLHWQNAATSHTKRAGLAGLGVRA
SGKFADNKLDFDAAVSGADSLSLKAKGSVAVTGTTIGTANVDATLANIPASIANSFVTDL
AAEGAVSGRVSAAGSLSAPTANFDLNWQNAVTSHTKRAGLAPLGIMASGKFAEHKLDFNA
AAVGDQGLSLKAAGNVALAGTAIDSLKVDAEIAKLPAALANAFVPNLAAGGTISGTISAA
GTLAAPKADFKLDWTDAATSHTRSADLSDLALAASGHLADNRLDFDANLGGKNGLSLKAA
GNVAIEGTSVRNLDVKADLANLPAGLANGFVPGLAAEGTVSGTASASGALPQPTVDFKLD
WKNAATAHTRSSGLSNLSAAASGKFANDRIDFDANLTGKDGLLAKATGGVTIAGTAIQDL
SINADIPALPASIANAFVPGLGAEGTLSASAVTSGTSADPIVDFKLDWKDAATSHTRAVG
LSRLALAATGKFAGDRLDFNANLSGGGIAVKAAGNLAIAGTSIQSVDVTANAENVPAGIA
NGFVPGLAAEGTVSATAKATGALSAPSVDFKVDWKNAATSQTKGAGLSPFTIGASGKLAD
NKLTVDTSLAGDAGMSLKGGGSVMISGDRALDMRFNGNLPFAVLGAPLAEQGFVAEGVAT
VDLRIGGTAAAPVINGTVATNSAKLVDVRRNLAVNNLAATVTFNGTQAVISRLNGNLGGG
GTISASGTIGIQPAGGFPADISIKLDKAVYVDGTLVVSTVNGTLGLRGPIMTATLSGKLR
LDKTSITVPEKLPTSLREIDIRHKNAPRAVLAQLRDDGERKPGQKSSVITLDLEIDAPSH
IFARGRGIDAELGGRVTIRGTAAAPIVTGGFTMRRGRLTILNRRLDFTDKSRITFAGDLT
PALDMEATSTSGSTTLTVDVAGLATDPSITFSSSPQLPQDEVLAQLIFGQSMSKLSPVQI
AQLADAVSQLAGNRSTSLFEGLRNQLGVDDLDISTDAKGQTSVSVGRYLNDRTYFELQQG
GSAGAKAIINLDVGRGVKLRGAAGGNGAGEAGVVYEREY
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgctggcaaaaatcgtcaactgggtcgtgcgggtcaccggctatgccgtcggc
gccattttggttctcgctgtcgcggcacttgcgatcttcggcttcacctcctttggcgcc
cgcatcgtcaccgaaaggatcgcctccaccctttccaaccgcgacatgaccatcgaggtg
cgcgaaccggaagggctattgaccggcgggcttcgcgccgccgaaatctccctgtccgac
acgaggggtgtttttgcggaaattcacggcgtggcgatagattggaatccgctggcgctg
ctgacgggaacattccacgccaagcgtttccagatcgacacgatcagcgtgctgcgcaag
ccggtgcgcaccctgccctcccggcccaacgcagaaaattccggtggcttcgcacttccg
gtcaaggtcgatgtcgaccatatggccctgcccgatatcaaactggccgaagcttttgcc
ggacgcgctttcgcgctcgccgccgaaggcagcctttcggcggatggcgacggcggcgaa
gcgatggtcaatgtcagccgccacgcggttccggatgcgcgtctaactgccgatatcgcc
tacgcgcccgccgagaaccggctgcggctgaaggcgcagcttgccgagccgaagggtggg
ctgttggcaggcttcctcggcctgcccggcaatcctgccgttaacatcgacctcgacggc
caaggaccgatatccaactgggcaggcaaaatgcaggctgcactcgacgggcaacagcgc
gctgcaatcgagggccggcacgcgattagcgcagacgggctgcaccatctcgatctcaag
ggtggcggtgacctgagctcgcttcttcccgcggcattccggccgcttttcgccggccag
accaatatcgacgtcgccgccactttcgacgaccgtggcaagatcgatatccagaccggc
aatatcgccactggcagcgtcgtcatcgccgcctcgggcgcgcttgatccggctggcaac
aacagcctgaacgccaatctgctcggcacatccggccccgttgatttccgctggccgctc
gccgagggcgaagcgcgcttcctgatatcaggcctcaacctggctctaacaggcgacgcg
cagaccgcccgactgagcctcagcggctcgctcgacagcgccacccttccgcaagccgat
atcggcaacgtcaagctgacggcaaagagcgacgccttcaatcttgccgcccgttccggc
agcgttcagctgcgcctcgttgccggcgatgcgaccttttccgaaccgaacctcaaccgc
gcagtccaaggccctatcacgatcgcctcgccgctccagatttcgccgggcgacatcggc
ttcaacggcaccaccgtcgaaagcgccaatatcaacggcattctcaacggctcctatcgg
ctggcggaccgcgcgttgaccggcaatgtcaagctgagcatcgaaccagcggccctgccg
gccgcggcgacgagcaggttcgatcggccgatctcgcttgaaagccaggtgaccggcact
ttcccgtcgaaattcgcgctgtccaacctcgtcctgaaatccggcacgcttgaagctgcc
ggcaacgtcgcgatcgacggctcgatgttgaacgccgatctttcaggtcggctgcccgat
atcggcaagctgatgacgggcgcgaccggcggagccggttacgctctgagggtcggaggc
gagctgccggcgatctccgtaacggccaatatcaaggctcccagcctgcagatgggcgat
cgcatggtcgccaacctcaatatcgatctgtcgggtgtcgccgatcccaaggcgccgcag
gggaagtttgcggccaccggcacgatcgacggacagccgatcggcatcaacggcgacatc
cgttctgagaacggcaagacaagcattcccggactgactgccgatatcggcggcaaccgg
ctgaccggcaatctggaattctcacccacgctggagccgaccggcgctctgaccttcgat
tttcccaatatcggcttgctcgccgcactcggcggccagaaagccgaaggcgatctcaag
ggttacctcggcgtcgagagcgacagcggcaggatcacgctcaagctgcttgcatcaggc
aactcgattcgtcgcgatacgcttgcgatcatcaagccggaaatagacgtcacgatcagc
gatctcggcgcgtttgcggcaaacgggaccgtcaaggccgaggcgctgaatgccgggacc
aacagccttgccaccctctcgctcggctttaccaaacagcaagatcataccgacttcgat
ctcaatgccgcctatgacggcaacccggtgctggcggccggcaatatcgcgacaacgagc
ggcgcgatcgatctgaacctcgatcgcttctcggcaagcccgcgcaatatcccgatcgag
cttgccgcaccgacgcaggtcacggtcgccaacggcgtcgccaatctgaacgggctgacg
ctgaaaaccggcgccggttcggtcagtgttaccggttcggccggcgagacgctgaagctg
aatgccgacatccgccacctgccggcagcactcgccaatggtttcgtgcccacgctttca
gccggcggcacgatctccggaaccatcgccgtcacgggaacgccggcagcaccgatcgcc
gatttcaagcttcactggacggatgcgacgacgggccagaccaaggacgcgggcctgatg
ccgctcggcatcaccgccggcggaaaattcgccgacaacaagctcgatttcgccacgacg
atcggcagcgacgacggtctctcgctcaaggccgccggcaaggtcgggcttgccgaccca
acgtcaccggtgcttgatatcgacgccgatatcctcaacctgccggcccgcatcgccaat
ggtttcgttgccgatctcgccgcagaaggcgtgataacgggaaaagcgaccgcctcgggc
tcccttaaggcgccaaccgccaatttcgacctcgtctggaaaaatgctgcgacgagccac
acgaagcgtgccggccttgcgggccttgaagtgacggcgtccggaaaattcgccgacaac
agactaaatttcgacgctgcggtcagcggcgccgacaacctatcactgaaggccagcggc
aatgtcggcatcatcgggacaacgattggtgaggtcaaggtcgacgctatactggccaat
gcccccgcgggccttgcaaacggtttcgtccccgatctcgcggcggaaggcactgtgtca
ggaacggtctctgccagcggatctcttgccgctccgaccgccgatttcgatctccattgg
caaaatgccgccacgagccacacaaagcgtgccggccttgccggcctcggcgtaagggcg
tccggaaagttcgccgacaacaagcttgatttcgacgctgcggtcagcggcgccgacagc
ctgtcgctcaaggcaaaaggcagtgtcgccgtcaccggtacgacgatcggcaccgcaaac
gtcgatgcgacactggcaaatatcccggcgagcattgccaacagcttcgtcaccgatctc
gccgccgaaggcgcagtctcgggaagggtctcggcggcaggctcgctttccgcgccgacc
gccaatttcgacctcaattggcaaaacgctgtaacgagccacacgaagcgagccggtctt
gcccctctcggcatcatggcgtcgggaaaattcgccgaacacaaactggatttcaacgcg
gcggccgttggcgatcaaggcctctcgctgaaggccgcgggcaatgtcgccctcgccggc
acggcgattgacagcttgaaggttgatgccgagatcgccaagctcccggccgctctcgcc
aacgctttcgttcccaatctggcggccggcggcacgatatcaggcactatatcggcggcc
ggcacactcgccgcgccgaaggccgatttcaagctcgattggacggatgccgcaaccagc
catacccgaagcgctgatctgtccgacctggcgcttgccgcttcgggacatcttgctgac
aataggcttgatttcgatgccaatctcggcggcaagaacggcctctcgctgaaagccgcg
ggcaatgttgcgatagagggcacctcggtccgcaatcttgacgtcaaggccgatctcgcc
aatctgcctgcgggccttgccaatggcttcgttcccggcctggcggcagagggcacggta
tcgggaacggcttccgcctccggcgcgctgccccaacccaccgtcgatttcaagctcgat
tggaaaaacgctgcaaccgcccataccaggagcagtggcctgtcaaacctgagcgccgca
gcatccggcaagttcgccaatgacaggatcgatttcgatgccaacctaaccggcaaggac
ggactgctggccaaggcgacaggcggcgtgacgatcgccggaacggccattcaggatctt
tcaatcaatgccgatatccctgccctgccggccagtatcgccaatgccttcgttcccggc
ctcggtgccgagggcaccctttcggcaagcgccgtcacctcaggcacctcggcagatccg
atcgtcgattttaaactcgactggaaggatgctgcgaccagccatacgcgggctgtcggc
ctttcccgcctcgcattggcggcgacgggaaaattcgctggcgacaggctcgatttcaat
gcgaatctcagcggcggtggcattgccgtgaaagcagccggcaacctcgccatcgcaggc
acttcgatccagtcggtcgacgttacggccaatgccgagaatgttccggccggcatcgcc
aacggctttgtccccggccttgccgccgaaggcacggtctcggcgactgcaaaggctacc
ggcgcgctgtcggcgccctccgtcgacttcaaggttgactggaagaacgccgcgacgagc
cagacgaaaggcgccgggctctcgcctttcaccatcggtgcatcaggcaaacttgccgac
aacaagctgacggtcgacaccagtctcgccggtgacgccggcatgtcgctgaaaggcggc
ggcagcgtaatgatatccggcgatcgcgccctcgacatgcgcttcaacggcaatctcccc
ttcgccgtgctcggcgcgccgcttgccgagcagggcttcgttgccgagggcgtcgccaca
gtcgatctccgaatcggcggaacggccgcagcgcccgtcatcaacggcactgtcgcgacc
aatagcgcaaagctcgtcgacgtccggcgcaatcttgccgtcaacaatctcgcagccact
gtgaccttcaacggcacgcaggccgtgatatcgcgcctcaatggcaatcttggcggcggc
ggcacgatttcggcgagcggcaccatcggcattcagccggccggcggctttcccgccgac
atttcgatcaagctcgacaaggcggtctatgtcgacggaacgctcgtcgtttcgaccgtc
aacggaacgctgggcttgcgcgggccgatcatgactgcgacgctgagtggcaagctccgc
ctggacaagacctcgatcaccgtccctgaaaaattgccgacctcgctgcgtgaaatcgac
atccggcataagaatgcgccgcgggcggtgcttgcgcagctgcgggatgacggcgaaagg
aaacccggccagaaatcctccgtgatcaccctcgatctcgaaatcgacgcgccctcgcat
atcttcgcgcgcggccgcggcatcgatgccgagctcggtggccgcgtgacgatccgcgga
acggcggcagcaccgatcgtgaccggcggtttcaccatgcgccgcggtcgcctgacgatt
ctcaaccgtcgactggattttaccgacaagagccggatcacctttgccggcgacctgacg
ccggcgctcgatatggaagcgacctcgacctccggctcgacgacgctgaccgtcgacgtc
gcgggcctcgccaccgatccttcgatcaccttttcctcttcgccccagttgccgcaggac
gaggtgctggcgcagctgatcttcggccagtcgatgtcgaagctctcgccggtgcagatc
gctcagctcgccgacgccgtcagccagttggccggcaaccgctccacgtcgcttttcgaa
ggcctgcgcaatcagctcggcgtcgacgatctcgacatcagcaccgatgccaaaggccag
acgagcgtcagcgtcggccgctacctcaacgatcgcacctatttcgaattgcagcagggc
ggctcggccggcgccaaggcgatcatcaacctcgatgtcggccgcggcgtcaaactgcgg
ggtgctgccggcggcaacggtgcgggggaagctggcgtggtctacgagcgggaatactga
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