Rhizobium etli CFN 42: RHE_CH03875
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Entry
RHE_CH03875 CDS
T00317
Symbol
priA
Name
(GenBank) primosomal protein N` (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHE_CH03875 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH03875 (priA)
Enzymes [BR:
ret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHE_CH03875 (priA)
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHE_CH03875 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABC92621
UniProt:
Q2K3G5
LinkDB
All DBs
Position
complement(4105979..4108195)
Genome browser
AA seq
738 aa
AA seq
DB search
MSIDSSDLFGALFEAPPANRTVPVLVPMPAPKPYSYSVPEGMAVEPGSVVQVPLGPRQVI
GVVWDGGEDGVDPKKLRPISHVFDCPPLSKEMRDFIDWVASYTLSPPGLVARMALRAPNA
FEPEPMVEGLKFVGGEPERMTPARARVLETASDGLSWTRSGLAHAAGVSTSVVDGLITLG
IFESMFLPPPPVVAMPDPDFAAARLEGPQKEAAAEIVSGVRRGEFSVSLIDGVTGSGKTE
VYFEAIAETLKRGKQVLILLPEIALTASFLERFQDRFGAKPAEWHSDLAPRMREKVWRQA
VTGEVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGDFPV
ILVSATPSVESQVNGQIGRYSTVHLPTRFGDAALPDLHLIDMRRHAPERGGFLSPVLIRA
ISKTVERREQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRKQLQCHQCGHAE
RTPEACPECGTLDHLVACGPGVERIAEEVERHFPEARTIVLSSDMMGGVKRLRLELDAIA
KGEADIVIGTQLVAKGHNFPLMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTG
LKSHGLLQTYQPQHPVMQAIVSGDSDAFYEREITERERAALPPFGRLASIIVSAETRHDA
ENHARGMRNAAPQVSGISVLGPAEAPLALVRGRHRFRLLVHGRRNSDMQGFLRAMLSQSP
KERGSVQVQLDIDPQSFV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagattcgtccgatctatttggcgcgcttttcgaagcaccgcccgcgaaccga
acggttcccgtgctggtgccgatgccggcgccgaaaccctattcctactcggtgcctgag
ggcatggcggtcgagcccggttcggtcgtgcaggtgccgctcgggccgcggcaggtgatc
ggcgtcgtctgggatggcggcgaagacggcgtcgatccgaagaagcttcgaccgatcagc
catgtcttcgattgcccgccgctttccaaggagatgcgggatttcatcgattgggtggcg
agctatacgctctccccgcccggcctcgtcgcgcgcatggcgctcagggcgccgaacgcc
ttcgagccggagccgatggtggaggggttgaaattcgtcggcggtgaacccgagcggatg
acaccggcgcgtgcgcgcgtgctcgagaccgcctccgatggcctgtcctggacgcgcagc
ggtctggcgcatgcggccggcgtttcgacgagcgtcgtcgatgggctgatcacgctcggc
attttcgaatcgatgttcctgccgccgccgcctgttgtggccatgccggatcccgacttt
gccgccgcacgcctcgaggggccgcagaaagaggcggccgcggaaatcgtctccggcgtc
cgcaggggcgaattttcggtgtcgctgattgacggcgtgaccggctccggcaaaaccgaa
gtctatttcgaggcgatcgccgagacgctgaaacgtggcaagcaggttctgatcctgctg
ccggagatcgccctcacggccagtttcctcgagcgttttcaggatcgcttcggggcaaaa
cccgccgaatggcattccgacctcgccccgcgtatgcgcgaaaaggtctggcgccaggcg
gtgaccggcgaagtgcgcgtcgtggccggcgcccgctcggcgctcttcctgcctttcgag
gatcttggcctcatcatcgtcgatgaggagcacgatccggcctacaagcaggaagatcgc
gtcttctacaatgcccgtgacatggccgtcgtgcgcggccgcatcggcgattttcccgtc
atcctggtctctgcgacgccgtcggtcgaaagccaggtcaacgggcagatcggccgctac
agcaccgtccacctgcccacccgtttcggcgacgcagcgctgccggatctgcatctcatc
gatatgcgcaggcacgcgccggagcggggtggcttcctgtcgccggtgttgatccgggcg
atcagcaagaccgtggagaggcgcgagcaggcgctgctctttctcaatcggcgcggatat
gcgccgctgacgctctgccgggtctgcggtcaccgcttccaatgcccgcaatgctcgagc
tggctggtcgagcatcgcttccgcaagcagctgcagtgtcatcaatgtggccacgccgag
cgcacgccggaggcatgcccggaatgcgggacgctcgaccatctggtcgcctgcgggccc
ggcgtcgagcgcattgccgaagaggtggagcgccatttccccgaggcgcggacgatcgtt
ctctcctcggatatgatgggcggggtgaagcggctgcggctggagcttgacgcaatcgcc
aagggtgaggccgatatcgtcatcggcacacagctcgtcgccaaggggcataattttccg
ctgatgacgctggtcggcatcgtcgacgccgatctcggtcttgccaatggcgatccgcgc
gcggccgagcgcaccttccagcttctgtcgcaggtgaccggccgcgccggccgcaccggt
ctcaaaagccatggattgctgcagacctaccagccgcagcatcctgtcatgcaggctatc
gtttccggggattccgatgctttttatgagcgcgagatcacggagcgcgaacgcgcggct
ttgccgccctttggccggctcgcctcgatcatcgtttcggccgaaacccgccacgacgcc
gagaatcatgctcgcggcatgcgcaacgcagcaccccaggtctccggcatctcagtgctc
ggcccggcggaagcgccgcttgccctggtgcgcggccgccatcgtttccgccttttggtc
cacggacgacgtaactccgacatgcaggggtttctgcgggcaatgctgtcgcaatcaccc
aaggagcgcggatcggtacaggtgcagctcgacattgatccgcagagcttcgtttaa
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