Rhizobium etli CFN 42: RHE_CH03897
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Entry
RHE_CH03897 CDS
T00317
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase cytochrome B-556 subunit protein
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00020
Citrate cycle (TCA cycle)
ret00190
Oxidative phosphorylation
ret00650
Butanoate metabolism
ret00720
Other carbon fixation pathways
ret01100
Metabolic pathways
ret01110
Biosynthesis of secondary metabolites
ret01120
Microbial metabolism in diverse environments
ret01200
Carbon metabolism
Module
ret_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ret_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHE_CH03897 (sdhC)
00650 Butanoate metabolism
RHE_CH03897 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
RHE_CH03897 (sdhC)
00720 Other carbon fixation pathways
RHE_CH03897 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
DUF3313
Fumarate_red_D
Motif
Other DBs
NCBI-ProteinID:
ABC92643
UniProt:
Q2K3E3
LinkDB
All DBs
Position
complement(4130946..4131341)
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AA seq
131 aa
AA seq
DB search
MANVTNNRPLSPHLQVYKLIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQASYDWA
NWVLGSLLGKLVLLGYTWALLHHMLGGFRHLMWDLGYGFEKEVSTKLAIANIIGSLCLTV
LVWVIGFLIRF
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgacaaataaccggcccctgtcgccgcatttgcaagtctataaacttatt
cccaccatggttatgtccatcgttcaccgcattaccggcggtgcgctctacgtcggcacg
ctgctcgtcgcctggtggctgattgcggcggcaagcggccaagcgtcctatgattgggcc
aactgggtgctcggcagccttctcggcaagctcgtgctgctcggttatacctgggcattg
ctgcaccacatgctcggcggcttccgccatctcatgtgggatctcggttatggcttcgag
aaggaagtctcgaccaagctcgccatcgccaacatcatcgggtcgctctgtctgaccgta
ctggtctgggtgatcggcttcctcattcgcttctga
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