Rhizobium etli CFN 42: RHE_CH04000
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Entry
RHE_CH04000 CDS
T00317
Symbol
ndvA
Name
(GenBank) beta-1,2-glucan ABC transporter, ATP-binding protein
KO
K24819
ATP-binding cassette, subfamily B, beta-glucan exporter [EC:
7.5.2.3
]
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH04000 (ndvA)
Enzymes [BR:
ret01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.3 ABC-type beta-glucan transporter
RHE_CH04000 (ndvA)
Transporters [BR:
ret02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RHE_CH04000 (ndvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
DEAD
RsgA_GTPase
AAA_30
Zeta_toxin
AAA_29
AAA_23
MMR_HSR1
nSTAND3
AAA_21
SMC_hinge
AAA_28
SRP54
DUF87
AAA
AAA_14
AAA_18
TsaE
cobW
AAA_24
DO-GTPase2
AAA_5
AAA_7
ResIII
NACHT
Thymidylate_kin
dNK
Motif
Other DBs
NCBI-ProteinID:
ABC92744
RhizoBase:
RHE_CH04000
UniProt:
Q2K342
LinkDB
All DBs
Position
complement(4233809..4235590)
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AA seq
593 aa
AA seq
DB search
MHKRLDVSLFKVYARALRYLGAYKLRVSLVVIANIVLATITIAEPILFGRIIDAISGKGE
VKPILFMWAAFAVFNTVAFVLVSREADRLAHGRRATLLTEAFGRIISMPLAWHHQRGTSN
ALHTLLRACETLFGLWLEFMRNHLSTVIALALLVPTAMSMDLRLSAVLIVLGIAYWLIGR
VVMSRTKDGQASVENHYHTVFSHVSDSISNVSVLHSYNRIEAETKALKSFANRLLEAQYP
VLDWWALASALNRMASTIAMMVVLIIGTMLVQSGELRIGDVIAFIGFANLLIARLDLMRQ
FATQIFEARSKLEDFYTLEDSVRDREEPAGNGEIKNVKGAIEFRDVSFGFGNSSQGLHNV
SFSVKAGQTVAIVGPTGAGKTTLVNLLQRVYDPQGGQILVDGTDITKVTRKSLRRHIATV
FQDAGLLNRSISDNIRLGREGASEEDMRRAAEAAAAADFIETREDRYDTHVGERGNKLSG
GERQRIAIARAILKDAPILVLDEATSALDVETEARVKAAIDNLRQNRTTFIIAHRLSTVR
EADMVLFLDDGRVVEQGGFDELSHSNGRFAALLRASGILTDEEVRKAHTTEAA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagaggttagacgtgtcgctattcaaggtctatgcaagagctctgcgctatctt
ggcgcttacaagctccgcgtatccctggtcgttatcgccaacattgttctggcgaccatc
accattgcggaaccgatcctgttcggtcgcatcatcgatgcgatatcgggcaagggtgaa
gtcaaacccatcctcttcatgtgggctgccttcgccgtgttcaatactgtcgccttcgtt
ctggtctcccgagaggccgaccggctcgcccatggccggcgggcaacgctgctgacggaa
gctttcggacgcatcatttccatgccgctcgcctggcaccatcagcgcggcacctccaac
gcgctgcatacgctgctgcgtgcctgcgagacgctgttcggcctctggctggaattcatg
cgcaaccacctgtcgacggtcattgcgctggccctgctggtgccgaccgcaatgtcgatg
gacttgcgcctctccgccgtgctgatcgtgcttggcatcgcctattggctgatcggccgc
gtggtcatgagccgcaccaaggatggccaggcttcggtcgagaaccactaccataccgtc
ttttcgcatgtcagcgactcgatcagcaacgtctccgttctgcatagctacaaccgcatc
gaagcggaaaccaaggcgttgaagtccttcgccaaccggctgctcgaagcgcagtatccg
gtgctcgactggtgggcgctcgccagcgcgctgaaccgcatggcctcgaccatcgcgatg
atggtggttctgatcatcggcacgatgctcgtccagtccggcgagctgcgcatcggtgat
gtcattgccttcatcggctttgccaacctgctgatcgcccgtctcgacctgatgcgtcaa
ttcgcaacgcagatcttcgaggcccgctccaagctcgaggacttctatacgctcgaagat
tccgtgcgtgatcgtgaagagccggccggcaatggcgagatcaagaacgtcaagggtgcg
attgaattccgcgacgtctccttcggcttcggcaacagttcgcagggcctgcacaatgtc
tccttctcggtaaaggcaggccagacggttgccatcgtcggcccgaccggcgccggcaag
acgacgctggtcaacctgctgcagcgcgtctacgacccgcagggcggccagatcctcgtc
gacggcaccgatatcaccaaggtgacccggaagtcgctgcgtcgccatatcgccaccgtc
ttccaggatgcgggcctgctgaatcgttcgatcagcgacaatatccgcctcggccgcgaa
ggtgcgagcgaggaggacatgcgccgtgctgccgaagccgccgccgccgccgacttcatc
gagacccgcgaggatcgttacgatacccatgtcggcgaacgcggcaacaagctctccggt
ggtgaacgtcagcgcattgcgattgcccgcgccattctcaaggatgcgccgatcctagtg
ctcgatgaagcgacctcggcgctcgacgtagagactgaagcccgcgtcaaggccgcgatc
gacaatctgcggcagaaccgcaccaccttcatcatcgcccaccgcctctcgacggtccgc
gaagccgatatggtgctcttcctcgatgatggacgtgtcgtcgagcagggcggcttcgat
gagctcagccacagcaacggccgcttcgccgcgctgctgcgcgccagcggcatcctgacg
gacgaagaagtccgcaaggcccataccaccgaagccgcctga
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