Rhizobium etli CFN 42: RHE_CH04002
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Entry
RHE_CH04002 CDS
T00317
Symbol
pyc
Name
(GenBank) pyruvate carboxylase protein
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00020
Citrate cycle (TCA cycle)
ret00620
Pyruvate metabolism
ret00720
Other carbon fixation pathways
ret01100
Metabolic pathways
ret01120
Microbial metabolism in diverse environments
ret01200
Carbon metabolism
ret01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHE_CH04002 (pyc)
00620 Pyruvate metabolism
RHE_CH04002 (pyc)
09102 Energy metabolism
00720 Other carbon fixation pathways
RHE_CH04002 (pyc)
Enzymes [BR:
ret01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
RHE_CH04002 (pyc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
ATP-grasp
Dala_Dala_lig_C
BSH_YknX
BSH_CusB
BSH_CzcB
BSH_RND
BSH_YhbJ
YqfD
ATP-grasp_3
Sulf_coat_C
Motif
Other DBs
NCBI-ProteinID:
ABC92746
UniProt:
Q2K340
Structure
PDB
PDBj
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All DBs
Position
4236888..4240352
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AA seq
1154 aa
AA seq
DB search
MPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLAR
DLGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQ
LGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIGYPVMLKASWGGGGRGMRVIR
SEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSVQ
RRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNP
RIQVEHTVTEVVTGIDIVKAQIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPE
HNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPNPLEAISRMD
RALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTPELFQQVKRQDRATKLLTYL
ADVTVNGHPEAKDRPKPLENAARPVVPYANGNGVKDGTKQLLDTLGPKKFGEWMRNEKRV
LLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDP
WERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFRVFDCLNWV
ENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDM
AGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGN
TSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEAVRNQYAAFESDLKGPASEVYLHEM
PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQDL
TVADVVSPDREVSFPESVVSMLKGDLGQPPSGWPEALQKKALKGEKPYTVRPGSLLKEAD
LDAERKVIEKKLEREVSDFEFASYLMYPKVFTDFALASDTYGPVSVLPTPAYFYGLADGE
ELFADIEKGKTLVIVNQAVSATDSQGMVTVFFELNGQPRRIKVPDRAHGATGAAVRRKAE
PGNAAHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAG
DQIDAKDLLAVYGG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
ttgcccatatccaagatactcgttgccaatcgctctgaaatagccatccgcgtgttccgc
gcggccaacgagcttggaataaaaacggtggcgatctgggcggaagaggacaagctggcg
ctgcaccgcttcaaggcggacgagagttatcaggtcggccgcggaccgcatcttgcccgc
gacctcgggccgatcgaaagctatctgtcgatcgacgaggtgatccgcgtcgccaagctt
tccggtgccgacgccatccatccgggctacggcctcttgtcggaaagccccgaattcgtc
gatgcctgcaacaaggccggcatcatcttcatcggcccgaaggccgatacgatgcgccag
cttggcaacaaggtcgcagcgcgcaacctggcgatctcggtcggcgtaccggtcgtgccg
gcgaccgagccactgccggacgatatggccgaagtggcgaagatggcggcggcgatcggc
tatcccgtcatgctgaaggcatcctggggcggcggcggtcgcggcatgcgcgtcattcgt
tccgaggccgacctcgccaaggaagtgacggaagccaagcgcgaggcgatggcggccttc
ggcaaggacgaggtctatctcgaaaaactggtcgagcgcgcccgccacgtcgaaagccag
atcctcggcgacacccacggcaatgtcgtgcatctcttcgagcgcgactgttccgttcag
cgccgcaatcagaaggtcgtcgagcgcgcgcccgcaccctatctttcggaagcgcagcgc
caggaactcgccgcctattcgctgaagatcgcaggggcgaccaactatatcggcgccggc
accgtcgaatatctgatggatgccgataccggcaaattttacttcatcgaagtcaatccg
cgcatccaggtcgagcacacggtgaccgaagtcgtcaccggcatcgatatcgtcaaggcg
cagatccacatcctggacggcgccgcgatcggcacgccgcaatccggcgtgccgaaccag
gaagacatccgtctcaacggtcacgccctgcagtgccgcgtgacgacggaagatccggag
cacaacttcattccggattacggccgcatcaccgcctatcgctcggcttccggcttcggc
atccggcttgacggcggcacctcttattccggcgccatcatcacccgctattacgatccg
ctgctcgtcaaggtcacggcctgggcgccgaacccgctggaagccatttcccgcatggac
cgggcgctgcgcgaattccgcatccgtggcgtcgccaccaacctgaccttcctcgaagcg
atcatcggccatccgaaattccgcgacaacagctacaccacccgcttcatcgacacgacg
ccggagctcttccagcaggtcaagcgccaggaccgcgcgacgaagcttctgacctatctc
gccgacgtcaccgtcaatggccatcccgaggccaaggacaggccgaagcccctcgagaat
gccgccaggccggtggtgccctatgccaatggcaacggggtgaaggacggcaccaagcag
ctgctcgatacgctcggcccgaaaaaattcggcgaatggatgcgcaatgagaagcgcgtg
cttctgaccgacaccacgatgcgcgacggccaccagtcgctgctcgcaacccgcatgcgt
acctatgacatcgccaggatcgccggcacctattcgcatgcgctgccgaacctcttgtcg
ctcgaatgctggggcggcgccaccttcgacgtctcgatgcgcttcctcaccgaagatccg
tgggagcggctggcgctgatccgagagggggcgccgaacctgctcctgcagatgctgctg
cgcggcgccaatggcgtcggttacaccaactatcccgacaatgtcgtcaaatacttcgtc
cgccaggcggccaaaggcggcatcgatctcttccgcgtcttcgactgcctgaactgggtc
gagaatatgcgggtgtcgatggatgcgattgccgaggagaacaagctctgcgaggcggcg
atctgctacaccggcgatatcctcaattccgcccgcccgaaatacgacttgaaatattac
accaaccttgccgtcgagcttgagaaggccggcgcccatatcattgcggtcaaggatatg
gcgggccttctgaagccggctgctgccaaggttctgttcaaggcgctgcgtgaagcaacc
ggcctgccgatccatttccacacgcatgacacctcgggcattgcggcggcaacggttctt
gccgccgtcgaagccggtgtcgatgccgtcgatgcggcgatggatgcgctctccggcaac
acctcgcaaccctgtctcggctcgatcgtcgaggcgctctccggctccgagcgcgatccc
ggcctcgatccggcatggatccgccgcatctccttctattgggaagcggtgcgcaaccag
tatgccgccttcgaaagcgacctcaagggaccggcatcggaagtctatctgcatgaaatg
ccgggcggccagttcaccaacctcaaggagcaggcccgctcgctggggctggaaacccgc
tggcaccaggtggcgcaggcctatgccgacgccaaccagatgttcggcgatatcgtcaag
gtgacgccatcctccaaggtcgtcggcgacatggcgctgatgatggtctcccaggacctg
accgtcgccgatgtcgtcagccccgaccgcgaagtctccttcccggaatcggtcgtctcg
atgctgaagggcgatctcggccagcctccgtctggatggccggaagcgctgcagaagaaa
gcattgaagggcgaaaagccctatacggtgcgccccggctcgctgctcaaggaagccgat
ctcgatgcggaacgcaaagtcatcgagaagaagcttgagcgcgaggtcagcgacttcgaa
ttcgcttcctatctgatgtatccgaaggtcttcaccgactttgcgcttgcctccgatacc
tacggtccggtttcggtgctgccgacgcccgcctatttttacgggttggcggacggcgag
gagctgttcgccgacatcgagaagggcaagacgctcgtcatcgtcaatcaggcggtgagc
gccaccgacagccagggcatggtcactgtcttcttcgagctcaacggccagccgcgccgt
atcaaggtgcccgatcgggcccacggggcgacgggagccgccgtgcgccgcaaggccgaa
cccggcaatgccgcccatgtcggtgcgccgatgccgggcgtcatcagccgtgtctttgtc
tcttcaggccaggccgtcaatgccggcgacgtgctcgtctccatcgaggccatgaagatg
gaaaccgcgatccatgcggaaaaggacggcaccattgccgaagtgctggtcaaggccggc
gatcagatcgatgccaaggacctgctggcggtttacggcggatga
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