Rhizobium etli CFN 42: RHE_CH04009
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Entry
RHE_CH04009 CDS
T00317
Symbol
gcpE
Name
(GenBank) 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase protein (terpenoid biosynthesis protein)
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00900
Terpenoid backbone biosynthesis
ret01100
Metabolic pathways
ret01110
Biosynthesis of secondary metabolites
Module
ret_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RHE_CH04009 (gcpE)
Enzymes [BR:
ret01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
RHE_CH04009 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
RHE_CH04009 (gcpE)
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Motif
Pfam:
GcpE
DUF6036
Motif
Other DBs
NCBI-ProteinID:
ABC92753
UniProt:
Q2K333
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Position
4245979..4247229
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AA seq
416 aa
AA seq
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MLSAADFDPKPRRASVAVDVGGVIVGGGAPIVVQSMTNTDTADIDSTVAQVAALHRAGSE
LVRITVDRDESAAAVPKIRERLLRLGMDVPLIGDFHYIGHKLLADHPACAEALAKYRINP
GNVGFKDKKDKQFAEIIEMAIRYDKPVRIGVNWGSLDQDLLTALMDENAAAGSPLSARQV
TREAIVQSALLSAALAEEIGLPRNRIILSAKVSQVQDLIAVNSMLAERSNHALHLGLTEA
GMGSKGIVASSAAMGFVLQHGIGDTIRVSLTPEPNGDRTREVQVAQEILQVMGFRQFVPV
VAACPGCGRTTSTVFQELAQNIQNDIRKNMPVWREKYPGVEALNVAVMGCIVNGPGESKH
ADIGISLPGTGETPAAPVFIDGKKALTLRGPNIAADFEALVVDYIEKRFGRQTAAE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagccgccgattttgatccgaaaccgcgccgcgcgtccgtcgccgtcgatgtc
ggcggcgtcatcgttggcggaggcgcgccgatcgtcgtgcaatcgatgacgaatacggat
acggccgatatcgattcgaccgttgcgcaggttgccgccctgcatcgggcaggctcggag
ctggtgcgcatcaccgtcgatcgcgacgagagtgcggctgccgtgccgaagatccgcgaa
aggctgctgcggctcggcatggacgtgccgctgatcggcgacttccactatatcggtcat
aaactgcttgccgatcatcccgcctgcgccgaggcgctggcgaaataccgcatcaatccc
ggcaatgtcggcttcaaggacaagaaggacaagcagttcgccgagatcatcgagatggcg
atccgctacgacaagccggtgcgcatcggcgtcaactggggctcgctcgatcaggacctg
ctgacggcgctgatggatgagaatgcggccgccggctcgccgctctcggcccggcaggtg
acgcgcgaggcgattgtccagtcggcgctgctttcggcagcgcttgctgaggaaatcggc
ctgccgcgcaaccgcatcatcctatcggcgaaggtcagccaggtgcaggatctgatcgcc
gtcaactccatgctcgccgaacgctcgaaccatgccctgcatctcggtctgaccgaagcc
ggcatgggcagcaaaggcatcgtcgcttcgtcggcggcgatgggcttcgtgctgcagcat
ggcatcggcgataccatccgcgtttccctgacgcccgagccgaacggcgaccgcacgcgc
gaagtccaggtggcgcaggaaattctgcaggtcatgggtttccggcagttcgtgcctgtc
gtggccgcctgtcccggctgcggtcgcacgacctcgacggtgttccaggaactggcccag
aacatccagaacgatatccgcaagaacatgccagtctggcgtgagaaatatccaggcgtt
gaggcgctgaatgtcgccgtcatgggctgtatcgtcaacggaccgggtgaaagcaagcac
gcagatatcggcatttcgcttccaggcaccggcgagacgcccgcagcaccggttttcatc
gacggcaagaaggccctgacgctgcgcggccccaatatcgccgctgatttcgaagcactt
gtcgtcgactatatcgagaagcgcttcggtcggcagaccgcggcggaatga
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