Rhizobium etli CFN 42: RHE_CH04026
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Entry
RHE_CH04026 CDS
T00317
Symbol
rpoH2
Name
(GenBank) RNA polymerase sigma factor protein (sigma-70)
KO
K03089
RNA polymerase sigma-32 factor
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ret03021
]
RHE_CH04026 (rpoH2)
Transcription machinery [BR:
ret03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHE_CH04026 (rpoH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
KORA
HTH_23
Sigma70_r3
HTH_3
HTH_10
RNase_E_G
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ABC92770
UniProt:
Q2K316
LinkDB
All DBs
Position
4262380..4263243
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AA seq
287 aa
AA seq
DB search
MKNMSADRRMIKIAMAAPYLARQEEHDLATRWKDHDDRGARNQIAMAHMRLVISMAGKFR
NFGLPMSDLVQEGYVGLLEAAARFEPERDVRFSTYASWWIRASIQDYILRNWSIVRGGTS
SAQKALFFNLRRLRAKLARGDTQLTLQSIHQEIAAALGVSLADVQTMDARLSGNDASLQA
PSVSGDAESAEKMDFLVSDDPLPDEQVSNMIDGERRRVWLASALKHLNEREMKIISARRL
AEDGATLEELGADLGISKERVRQIESRAMEKLRSALVSADPHMAAYA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatgtctgcagatcggcgcatgatcaaaatcgcgatggccgccccctatctc
gcccgtcaggaagagcacgatctcgccacccgctggaaagatcacgacgatcgcggtgcg
cgcaaccaaatcgccatggcgcatatgcgcctggttatctccatggccggcaagttccgc
aatttcggtctgccgatgagcgacctcgtgcaagagggctatgtcggtctgctggaggcc
gccgcgcgtttcgaaccggaacgggacgtgcgcttttcgacctatgccagctggtggatc
agggcgtcgatccaggattatatcctgcgcaactggtcgatcgtgcgcggcggcaccagt
tcggcgcagaaggcgctgttcttcaatctgcgccgcctgcgcgccaaactcgccaggggc
gatacgcagttgacgctgcaatccattcatcaggaaatcgccgcagccctcggcgtcagc
cttgccgatgtgcagaccatggatgccaggctttccggcaacgacgcttcgctccaggcg
ccttccgtctccggcgatgccgagagcgcggagaagatggattttctcgtcagcgacgat
ccgctgccggacgagcaggtttccaatatgatcgacggcgagcgccgccgcgtctggctc
gcttcggcgctgaaacatctcaacgaacgcgagatgaagatcatcagcgcccggcgcctg
gcggaagacggcgccacgctcgaagagctcggcgccgatctcggcatttccaaggagcgc
gtgcgccagatcgaaagccgggcgatggaaaagcttcgcagcgcgctggtcagcgccgat
ccgcatatggcagcctacgcgtga
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