Rhizobium etli CFN 42: RHE_CH04118
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Entry
RHE_CH04118 CDS
T00317
Name
(GenBank) putative DNA polymerase III, delta subunit protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03030
DNA replication
ret03430
Mismatch repair
ret03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHE_CH04118
03430 Mismatch repair
RHE_CH04118
03440 Homologous recombination
RHE_CH04118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ret03032
]
RHE_CH04118
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH04118
Enzymes [BR:
ret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHE_CH04118
DNA replication proteins [BR:
ret03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHE_CH04118
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHE_CH04118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ABC92861
UniProt:
Q2K2S5
LinkDB
All DBs
Position
4371850..4372890
Genome browser
AA seq
346 aa
AA seq
DB search
MAEIKSHEFETFLQKSAGNYRIFVIYGPDRGLVSERAGQLAGKTGVALDDPFSLTKLDIG
DLQKDPGRLVDEAQSIGLFGGEKLIWIRGAANEKYLVDSLALLAEKPLEAAYLIVEAGDL
KKGSLLRKTAEAARSVMTIPSYADDSRALNGLIDAELGAEKLGITPAARQALIALIGGDR
IASRNEVRKLALYCSGLNTVEEHHVSEIIGDASAISVDDAVDAVLSGDLNGFLHAMQKIS
SSKTAIFLVLQACLKQFQLLDMMRAEMEEKRVQAPQIMQTMGRHLHFRRKPIIEQALRHW
SAENIARESNRLQAAILQSRRRQVLEDSVAMQTLLSTTLQSGRKST
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaatcaagtcccatgaattcgagactttcctgcagaaatcggcggggaactat
cggattttcgtcatttacgggccggatcggggtctggtttccgagcgcgccggtcagctc
gccggcaagaccggtgttgcgctcgacgaccctttctcgctgaccaaactcgacatcggc
gatctgcagaaggatccgggacgcctggttgacgaggcacagtctatcgggctgttcggc
ggcgagaaactcatctggatccgcggtgcagccaacgaaaaatacctcgtggactcgctg
gcattgctggccgaaaagccgctcgaagccgcttacctgatcgtcgaggccggcgatctg
aaaaaaggatccctgctccgcaagacggcggaagccgcacgatccgtcatgaccatcccc
tcctacgccgacgacagccgcgctctgaacggcttaatcgacgctgaactcggggcggag
aagcttggcattaccccggccgcccgtcaggcgctgatcgcactgatcggcggtgatcgc
atcgcttcccgcaacgaagtgcgcaagctcgccctctattgcagcggcctcaatacggtt
gaggaacatcacgtttccgaaataattggcgacgccagcgcgatatccgttgatgacgct
gttgatgccgtcctcagcggtgatctcaacggtttcctgcatgccatgcaaaagatcagc
agttcaaaaacagcgatctttctggtgctacaggcctgtctaaagcaattccagcttctg
gacatgatgcgcgctgaaatggaagaaaaaagggtgcaggcgcctcaaatcatgcagacg
atgggtcggcaccttcattttcgccgcaagccgatcatcgagcaggcgctccgccattgg
tcggcggaaaacatcgcacgcgaatccaatcggctgcaggcggcaatcctccaaagccgg
cggcggcaggtgctggaagacagcgttgcaatgcaaacacttctctccactacccttcaa
tccggccgcaaatccacctga
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