KEGG   Rhizobium etli CFN 42: RHE_PA00172
Entry
RHE_PA00172       CDS       T00317                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein F
  KO
K20531  type IV secretion system protein TrbF
Organism
ret  Rhizobium etli CFN 42
Pathway
ret02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ret00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHE_PA00172 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ret02044]
    RHE_PA00172 (trbF)
Secretion system [BR:ret02044]
 Type IV secretion system
  Trb secretion system protein
   RHE_PA00172 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ABC93034
UNAM_a: RE1PA0000172
RhizoBase: RHE_PA00172
UniProt: Q2K2Q8
LinkDB
Position
p42a:complement(182561..183223)
AA seq 220 aa
MAANRAPENPYLAARQEWSERYGSYVQAAAAWRIVGILGLTMAVIGFGYSMYLSTQVKLV
PYIVRVDKLGTAVTAGFPEQIEYADVRVVRATLGNFVTSFRSITPDAVVQKKYIDRTYAL
LRTSDPSTEKINAWFRGNSPFEKAKSSTVAIEVNNIVALSNQTYQIDWTEYERDRKGKEI
GTRRFRGIATVTLTAPQDEATIRLNPIGLYVRDFDWTAQL
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagcgaaccgcgcccccgaaaacccgtatctcgctgcgcgccaggaatggagcgag
cgatacggctcctatgtccaggcagccgccgcatggcgcattgtcggcattctcggtctg
accatggccgtcataggctttggctattcgatgtatctcagcactcaggtcaagctggtt
ccctatatcgtccgggtcgataaactgggcacggcggtgaccgcgggcttccctgaacaa
atcgaatatgcggatgtccgggtggtgcgtgccacactcggcaatttcgtcaccagcttc
cgttcgatcacacccgatgccgtggtgcagaaaaaatatatcgaccggacctacgcactc
cttcgaacatctgatccatcgaccgagaagatcaacgcctggttccgcggcaattcccca
ttcgagaaggcgaaatcgtcgacggtggcgatcgaggtcaacaacatcgtggcgctgtcg
aaccagacctatcagatcgactggactgaatacgaacgggaccggaagggcaaggaaatc
ggcacacgcagattccgcgggatcgcgacggttacgctcaccgcgccgcaggatgaggcg
acgatccgcctcaatccgatcggtctctacgtccgggatttcgattggacagcgcagctt
taa

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