KEGG   Rhizobium etli CFN 42: RHE_PA00178
Entry
RHE_PA00178       CDS       T00317                                 
Symbol
trbB
Name
(GenBank) conjugal transfer protein B
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ret00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHE_PA00178 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ret02044]
    RHE_PA00178 (trbB)
Enzymes [BR:ret01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RHE_PA00178 (trbB)
Secretion system [BR:ret02044]
 Type IV secretion system
  Trb secretion system protein
   RHE_PA00178 (trbB)
SSDB
Motif
Pfam: T2SSE ResIII DEAD nSTAND3 AAA_19 AAA_16 Sigma54_activat FtsK_SpoIIIE AAA_30 PhoH cobW Zeta_toxin AAA_28 AAA_29 NACHT AAA_7 LFE_1968-like TrwB_AAD_bind AAA_22 TsaE IstB_IS21 AAA_11 Mg_chelatase NPHP3_N Bac_DnaA ABC_ATPase SLFN-g3_helicase DUF87 ABC_tran GpA_ATPase AAA NTPase_1 AAA_23 RsgA_GTPase RNA_helicase Sld3_STD KAP_NTPase AAA_18
Other DBs
NCBI-ProteinID: ABC93040
UNAM_a: RE1PA0000178
UniProt: Q2K2R0
LinkDB
Position
p42a:complement(188520..189497)
AA seq 325 aa
MNQLRSHPRLVRKLQEALGDQLCVALDDSTVVEIMLNPDGKLFIERLGHGVAPAGEMSSA
AAEMVIGTVAHALQSEVDTEQPIISGELPIGGHRFEGLLPPVVAKPAFTIRRRALRLIPL
DDYVRSAMMTEHQASTIRSAISSRLNIIISGGTGSGKTTLANAVIAEIVKSAPEDRLVIL
EDTAEIQCAADNAVLLHTSDTVDMARLLKSTMRLRPDRIVVGEVRDGAALTLLKAWNTGH
PGGVATIHSNTAMSALRRLEQLTAEASQQPMHEVIGEAVDLIVSIERTPRGRRVRDVIQV
ERFAGGQYEIESDQLTEEQEARHVA
NT seq 978 nt   +upstreamnt  +downstreamnt
gtgaaccagcttcgctcccatccccgacttgtccgaaaacttcaggaggctctcggcgat
cagctttgcgtcgcgttggacgactcaaccgtcgttgaaatcatgctcaatcccgatggc
aagctattcattgaacggctggggcatggcgtggcgccagccggcgaaatgtcttcagcg
gctgcggaaatggtgatcggaaccgtggcacatgcactccagtcggaggtcgacaccgag
cagccgatcatctcaggggaattgccgatcggaggtcatcgcttcgaaggattgttgcct
ccggtcgtcgccaaaccggccttcaccatcaggcggcgtgccttgcgcctgatcccgctc
gacgattatgtgcggtctgccatgatgaccgaacaccaggcttcgaccatccgcagcgcg
atttcgtcgcggctcaatatcatcatctccgggggcacaggatcaggcaagacgacgctc
gccaacgccgttatcgctgaaatcgtcaagtcggcccctgaagaccgtctggtcattctg
gaggacaccgccgagattcaatgcgccgccgacaacgccgtgcttctccacaccagcgat
acagtcgacatggcgcgactgttgaagagcaccatgcgcctgcgtccggatcggatcgtg
gtcggcgaggtccgcgacggggctgcgctcacgttgctgaaggcatggaacaccggtcat
ccaggaggcgtggcaaccatccattccaacactgcaatgtcggcgcttcgccgccttgag
caactgaccgccgaagccagccaacagccgatgcacgaagtgatcggtgaagcggtcgat
ctcatcgtctcgattgaacggacgccgcgcgggcggcgtgttcgcgacgtcatccaggtc
gagcgcttcgcaggcggccaatacgagatcgaatccgaccagcttacagaagaacaggag
gcgcgccatgtcgcgtag

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