Rhizobium etli CFN 42: RHE_PB00002
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Entry
RHE_PB00002 CDS
T00317
Symbol
lpsB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00541
Biosynthesis of various nucleotide sugars
ret00552
Teichoic acid biosynthesis
ret01100
Metabolic pathways
ret01250
Biosynthesis of nucleotide sugars
Module
ret_M01009
UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RHE_PB00002 (lpsB2)
00552 Teichoic acid biosynthesis
RHE_PB00002 (lpsB2)
Enzymes [BR:
ret01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
RHE_PB00002 (lpsB2)
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Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
adh_short
C2185-like_N
KR
CoA_binding
adh_short_C2
PglD_N
Motif
Other DBs
NCBI-ProteinID:
ABC93046
UNAM_b:
RE1PB0000002
UniProt:
Q2K1T0
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All DBs
Position
p42b:1051..3018
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AA seq
655 aa
AA seq
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MPRAAKRALALLVDSGLCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSLCMALPIFIVMGM
YRAIFRYANMAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLLLIAIGLSRL
GIRYWLGDTYQRILHQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVGYLDDDPRLKGGI
MGGLPIYDPSDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRKARVNVRTLPDLTALA
QGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAGGSIGGELCRQILRNA
PSSLILIDQNEFALYNIHAELLKLAEVYKHEGLQIVPILCSVRDQDRMEHIMESWRPQTL
YHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKYGVSNFVLISTDKAVRPTNVMGAS
KRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQQIKEGGPVTLTHPKI
TRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELSGLTVRDVDNPEG
DIELAVTGLRPGEKLYEELLIGDNPETTEHPRIMKAREDFLFWAELSKKLNSLNASLDRN
DMVAARATLAELVSGYSSTGEVSDLAFTGAETNPAHEDVNALASGAGNQLRTTGA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgctgccaaacgcgctctcgccttgctggtggattccggtctttgtgtcctg
acgatctggctggcttattgcttccgtctgaacgaatggacggtgctaacaggcgtgcag
tggttgccggtcttcgtttccttgtgcatggcgcttcccatcttcatcgtcatgggcatg
tatcgggcgatcttccgttatgccaacatggccgctttcattgccgttctaaaagccatt
gcgatctacggtgtcgccttcatgacgatatttacggcgctcagcgtcccgggcgttccg
agaaccgtcggcattctccagcccttcctgctgctgattgcgatcggcctgtcgcggttg
ggtatccgttattggctcggggatacttaccagcgtatccttcaccagaacacgctcgcc
aaggtgttgatctatggggcgggaaatgccgggcggcaactcgccggcgctctgacgaac
agcgccgaactcaatgtcgtcggctacctcgatgatgatccgcgccttaagggcggcatc
atgggcggtttgccgatctatgacccgtcggatcttccggtgctcgccgaaacacttggc
gtgcacaacgtgcttcttgctcttccatccgcatcgcggcagcgtcgcaatgaaattctc
gagcatatccgcaaagccagggtgaacgtccggactttgccggatctcaccgctctggct
caaggacgagtcgcggtttccgatattcgtgagctggagatcgaagacctgctcggcagg
gaagcggttgcgccgcggcaagagctgctcgacaaggcgatgcgcaacaaggtggtgatg
gtcacgggtgccggcggctccatcggcggcgagttatgccgccagattctgcgcaacgcg
ccttcaagcctcatcctcatagatcagaacgagtttgcactttataatattcatgccgaa
ttgctgaagctggccgaagtttacaagcatgaggggctgcagatcgtgccgatcctttgt
tccgtccgcgaccaggatcgcatggaacatatcatggaaagctggcggcctcagacgctt
tatcacgccgccgcttacaagcatgtgcctctcgtcgaacacaacgccgtggaaggcatc
aagaacaatgtcatggggacattgatcaccgcacgtgcggcaaataaatacggcgtttcg
aatttcgtgctgatcagcaccgacaaagccgtgcgcccgacgaatgtgatgggtgccagc
aagaggctggcggagatggtgctgcaggcgcttgcggcagagctgaccgctgacagactg
cggacaaatttctcgatggtccgcttcggaaatgtcctcggttcctccggatccgtcgtg
ccgctgttccggcagcagatcaaggaaggcggcccggttaccctgacgcatccgaagata
acccgctatttcatgaccatttcggaagcctcgcaacttgtcatccaggcgggcgccatg
gccgagggcggcgatgttttcctgctcgatatgggcgagcccgtccgcattgcggatctc
gcccgcaagatggtcgaactgtccggattgaccgtccgggacgtggataatccagagggg
gacatcgagcttgccgttaccggcctgcggcccggcgagaagctttatgaagaactgctg
atcggcgataaccccgagacaactgaacatccgcggattatgaaggcgcgcgaggatttc
ctgttctgggcagaactttcgaagaagctcaactcgctcaatgcgtcgttggaccgaaac
gacatggtcgcggcgcgcgcgaccttggcagaactcgtttccggctattcctcaacgggc
gaggtttcagatcttgcgttcaccggggccgaaaccaatccggcgcatgaagatgtcaac
gcgctagcctcaggcgcaggaaatcagcttcgaaccacaggtgcatag
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