Rhizobium etli CFN 42: RHE_PB00032
Help
Entry
RHE_PB00032 CDS
T00317
Name
(GenBank) putative oligopeptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PB00032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PB00032
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_PB00032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABC93076
UNAM_b:
RE1PB0000032
RhizoBase:
RHE_PB00032
UniProt:
Q2K1V9
LinkDB
All DBs
Position
p42b:34769..36406
Genome browser
AA seq
545 aa
AA seq
DB search
MSFDQSDKTNLSRRNALKFGLAAGVGLTVFGMNARIVLADEGQVLKVAHPAFDQDWSPLR
GGGRTFRWNSIWWASPMYFDSQGNIKPYVFTSWESADNTVWTFKIDPKAVFSDGSKITSA
DVKGSWEVASMPNTKSQRADQVLSKVKGYAEIAAGSANELTGVATPDEGTVVVTLAAADP
IFFMRLANHIAPITKASQSRGSDGEEIIDWYKPENKPVFSGPFKLTSIDIDAGKITFEPN
ENFFGPKPKLARIDITSIEDNVTATSLIKSGEFNAHTELVTSTIIQDLGPEFSAGPLIPT
SQHFWFNISRAPMDDPKVRQALIMAVDRDGLFKASYPDGPHKKADQILNSVPGADNSGFE
PFPYDPAAAKKLLAESSYGGPERLPKILFVGISAPAIQAAAQFIAEQWRQNLGITAVDMK
PQQDAYAGPDQNSVQIFRDDVGTRVPDAVSYLTGSIASTSSNAQNKLGGYKNDKVDSALA
EAATKAADDPQRVALAQQAQKAFREDWAFIPWYSQAMSRWATKEVKGLEKNLDWQIAEPW
NISIG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatcaatcggataaaaccaatctatcgcgccgcaacgcgctgaagttcggc
cttgccgccggcgtcgggctgaccgtgttcgggatgaatgcccgcatcgtgctggccgat
gaaggccaggtcctgaaggtcgcccatccggccttcgaccaggattggtcgcccctgcgc
ggcggcggcagaaccttccgctggaactcgatctggtgggcttcgccgatgtatttcgac
agtcagggcaatatcaagccctacgtcttcaccagctgggaatcggccgacaacacggtc
tggaccttcaagatcgaccccaaggccgtcttctccgacggcagcaagatcacctcggcc
gacgtcaagggatcgtgggaagtcgcctcgatgccaaacaccaagagccagcgcgccgac
caggtgctgagcaaggtcaagggctacgcagaaatcgccgccggctcggccaatgaactg
accggtgtcgcgactcccgatgagggaacggtcgtcgtgacgctcgccgccgccgatccg
atcttcttcatgcgtctcgcaaatcacatcgcaccgatcaccaaggcgtcgcagtcgcgc
ggcagcgacggtgaggaaatcatcgactggtacaagcctgagaacaagccggtcttctcc
ggcccgttcaagctgacgagcatcgatatcgatgccggcaagatcaccttcgagccgaat
gagaacttcttcgggccgaagccgaagcttgcccgcatcgacatcacctcgatcgaggac
aatgtgacggcgacttcgctgatcaagtcgggcgagttcaacgcccacaccgagctcgtc
acctcgacgatcattcaggatctcggcccggaattctcggccggtccgctgatcccgacc
agccagcacttctggttcaacatttcccgcgcgccgatggacgatccgaaggtacgccag
gcgctgatcatggcggtcgatcgcgacggcctgttcaaggcatcctatccggatgggccg
cacaagaaggccgaccagattctcaattcggttcccggcgccgacaattccggcttcgag
ccctttccctatgatccggcagccgccaagaaactgcttgccgaatcgagctatggcggc
cccgaacgcctgccgaagatcctgttcgtcggcatttcggcgccggccattcaggccgcc
gcccagttcatcgccgagcagtggcgccagaatctcggcatcacggccgtcgacatgaaa
ccgcagcaggacgcctatgccggtccggatcagaactcggtccagatcttccgcgatgac
gtcggcacccgtgttcccgacgccgtttcctatctcacgggcagcatcgcctcgacctcg
tcgaacgcgcagaacaagctcggcggatacaagaacgacaaggtcgacagcgcccttgcc
gaagcagcaaccaaggctgcggatgatccgcagcgcgttgctctcgcccagcaagcccag
aaggcattccgcgaggattgggccttcattccatggtattctcaggcgatgtcgcgctgg
gccaccaaggaggtcaagggactcgagaagaacctcgactggcagatcgccgagccttgg
aacatctccatcggctga
DBGET
integrated database retrieval system
