Rhizobium etli CFN 42: RHE_PB00034
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Entry
RHE_PB00034 CDS
T00317
Name
(GenBank) putative oligopeptide ABC transporter, permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PB00034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PB00034
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_PB00034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ABC93078
UNAM_b:
RE1PB0000034
RhizoBase:
RHE_PB00034
UniProt:
Q2K1W2
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All DBs
Position
p42b:37495..38454
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AA seq
319 aa
AA seq
DB search
MSAIPLSTTETIEEPPVSLWRDAWHRLRRNKLAVFGLIVVLLLAFTAIFGPYLTPYDYLS
QDLNARNALPSMSHLFGTDDLGRDVFSRVVFGTRTAFLVAVIVTFFAVLIGLTLGAVAGF
FGNPFDRAIMWLTDVTMSVPNLLLVVVINASLKSPITRWMEARYLETLNPFYRQTIWVDF
ILVFGSMALISWPPYARLVRAQVLSIRSRPYITAAQALGLSNWVIIKRYVVPNALGPLIV
SVSAGLGTAMVLESAFSFLGVGVNPPTPSWGNMISDGLRVWQHYPHLLAAPAAVLGLASV
AFSFLGDGLNDALNPRGSK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaatccctctttccaccaccgagaccatcgaggagccgccggtcagcctgtgg
cgcgacgcctggcatcggctgcggcgcaacaagctcgccgtcttcggcctcatcgtcgtc
ctgctgctggccttcaccgcgatcttcgggccgtatctcacgccctatgattacctcagc
caggacctcaacgcgcgcaacgcgctgccgtcgatgagccatctcttcggaaccgacgac
ctcggccgcgatgtcttcagccgcgtcgtcttcggcacgcggaccgccttcctcgtcgcc
gtcatcgtcaccttcttcgccgtgctgatcgggctgacactcggtgccgtcgccggtttc
ttcggcaatcccttcgaccgggccatcatgtggctgaccgacgtgacgatgtcggtcccc
aacctgctgcttgtcgtcgtcatcaatgcctcgctgaaatcgccgatcacccgatggatg
gaggcgcgctacctcgagactctcaatcctttctaccgccagacgatctgggtagatttc
atcctcgtcttcgggtcgatggcgttgatctcctggccgccctatgcccgtctcgtgcgc
gcccaggttctgtcgatccgcagccggccctatattaccgccgctcaggctctcggcctg
tcgaactgggtcatcatcaagcgttatgtcgtgccgaatgcgctcgggccgctcatcgtc
tcggtcagcgccggtctcggcacggcgatggtgctggaaagcgccttcagcttccttggg
gtcggggtcaatccgccgacgccgagctggggcaacatgatctcggacggccttcgcgtc
tggcagcattatccgcatcttctcgccgctccggcggccgtgctcggccttgcctcggtt
gccttcagcttcctcggcgacggcctcaacgacgcgctcaatccgcggggcagcaaatga
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