Rhizobium etli CFN 42: RHE_PB00089
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Entry
RHE_PB00089 CDS
T00317
Name
(GenBank) putative transcriptional regulator protein, LuxR family
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02020
Two-component system
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RHE_PB00089
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PB00089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ret03000
]
RHE_PB00089
Transcription factors [BR:
ret03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RHE_PB00089
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
HTH_38
WIYLD
RyR
HTH_20
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ABC93131
UNAM_b:
RE1PB0000089
RhizoBase:
RHE_PB00089
UniProt:
Q2K212
LinkDB
All DBs
Position
p42b:complement(101810..102604)
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AA seq
264 aa
AA seq
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MLDDIGMIRRQFTTHETLEGRIDQAFEAMKQLGFEALIYDYTPVPYDIDGVIMVPSLLKL
RNIAEDMHDYWFDRGYFRIDPVQQVALRTSAPFFWNYDPDADTLIRRFMSEDTAPVTRYL
SERDMSTGVTVPVHMPRGDYATVTGIRFGRNSDFERHALRYIADFNLLAHVFHETAYALF
DRKDKSVGIRLTERERECLRHSAEGYSAKEISRIIDRSVPTVVMHLNAAAKKLGARNRTQ
AVVRATHYRLLEDRPTQTWSPYNL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgacatcggaatgatcagacggcagtttacgacgcatgaaacgctggagggc
cggatcgaccaggctttcgaggcaatgaagcagctgggcttcgaggccctcatctatgat
tatacgccggtaccctatgatattgatggcgtgatcatggtaccgtcgctgctgaagctc
aggaacatcgccgaggacatgcacgactattggttcgatcgcggttatttccgcatcgat
ccggtccaacaggtggcgctgcgcacctccgcaccgtttttctggaactatgatcccgac
gccgatacgctgatcaggcgctttatgagcgaggacactgcaccggtgacgcgctatttg
agtgaacgcgacatgtctaccggcgtcactgttccggtgcatatgccgcgcggagactac
gcgaccgtcaccggcatccgtttcggccggaacagcgatttcgaacgacatgcgctgcgc
tatatcgccgacttcaacctgctggcgcatgtttttcacgagacagcctatgcgcttttc
gacaggaaggacaaaagcgtcggcatccgcctgacagaacgggagcgcgaatgtttgcgc
cattctgcggaaggctattcggccaaggaaatctcccgcatcatcgaccgttccgtaccc
accgtggtcatgcatctcaatgccgcagcaaagaagctcggcgcccgcaatcgaacgcag
gctgtggtgcgcgccacccactaccgcctgcttgaagaccggccgactcagacctggtca
ccctataacttgtga
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