Rhizobium etli CFN 42: RHE_PC00039
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Entry
RHE_PC00039 CDS
T00317
Name
(GenBank) probable sugar ABC transporter, substrate-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PC00039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PC00039
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
RHE_PC00039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABC93246
UNAM_c:
RE1PC0000039
RhizoBase:
RHE_PC00039
UniProt:
Q2K183
LinkDB
All DBs
Position
p42c:complement(34240..35520)
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AA seq
426 aa
AA seq
DB search
MTHRIKLILAGASALLAFKASPSHAESTLSFLIDNNPDTVAAAEALVAAYQAKVPDVTIE
IEPRAGGGEGDNIIKTRLATGEMSDVFLYNSGSLLQALKPAQTLVDLSGLESQVKVDEGF
KSVVRADGKLYGVPFGTAMAGGILYNRKIYQDLGLTVPKTWADFMANNAKVKTSGKVAVA
QTYRDTWTSQLFVLADYYNLHAVVPNFAADYTANKAKYAETPAATKGFERLKDVHDAGLM
NEDFGAASYDDGLRMVATGEAAHYPMLSFAIGAIKQNYPENLADVGFFAQPSDDAQTNGL
TVWMPPALYIPLTSQHAEEAKKFVDFAGSVEGCKIMVETNTVQGPPLIDGCDLPADVPPA
VKDMLPYFEAKGKTTPALEFVSPVKGPALEQITVEVGSGIRQPAEAAKLYDEDVRKQAKQ
LGLPNW
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcggataaagctcattcttgccggcgcatccgcgcttctggccttcaaggcc
agcccgtcgcatgcagaaagcacgctgtctttcctgatcgacaacaaccccgacacggtc
gcggcagccgaagcactcgttgcggcctaccaggccaaggtgcccgacgtgacgatcgaa
atcgagccgcgggcaggcggcggcgagggtgacaacatcatcaagacgcgcctggcgacg
ggggagatgtccgatgtgttcctctataattctggctctctcttacaggcgctgaagccg
gcgcagacacttgtcgatctgagcggtctcgagtcgcaggtgaaggtggatgaaggcttc
aagtcggtcgtccgtgccgatggcaagctctacggcgttcccttcggcacggcgatggcg
ggtggcatcctctacaacaggaagatctatcaggacctcggcctcaccgttccgaagacg
tgggcggatttcatggccaacaatgccaaggtcaagacttcgggcaaggtcgccgtggcg
cagacctatcgcgatacctggacatcgcagctgttcgttctggccgactattacaatctg
catgccgtcgtgccgaacttcgccgccgactataccgccaacaaggcgaaatatgcggag
acgcccgccgccacaaaaggcttcgaacggctgaaggatgttcacgacgccggcctgatg
aacgaggatttcggcgcggcaagctatgacgacggcctcagaatggtggcgaccggcgaa
gcggcgcattatccgatgctgagcttcgccatcggcgcgataaagcagaattatcccgag
aaccttgcagatgtcggtttcttcgcgcagccgagcgacgatgcgcagacgaacggcctg
accgtctggatgccgcccgccctctatattccgctgaccagccagcacgctgaggaagcg
aagaaattcgtggatttcgccggaagcgtcgaaggctgcaagatcatggtggaaaccaac
accgtgcaggggcctccgctgatcgacggctgcgatctgcctgccgacgtgccgcctgcc
gtaaaggacatgctcccctatttcgaggccaagggaaagacgaccccggcattggaattc
gtatcaccggtgaagggcccggctctcgagcagatcaccgtcgaagtcggttccggcatc
cgccagcccgccgaggcagcgaagctctatgacgaggatgtgcgcaaacaggccaagcag
ctcggcctgcccaactggtag
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