Rhizobium etli CFN 42: RHE_PC00097
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Entry
RHE_PC00097 CDS
T00317
Name
(GenBank) probable insertion sequence transposase protein
KO
K07482
transposase, IS30 family
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RHE_PC00097
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_38
HTH_23
rve
HTH_28
DUF6362
HTH_29
DUF2481
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ABC93304
UNAM_c:
RE1PC0000097
RhizoBase:
RHE_PC00097
UniProt:
Q2K1E3
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All DBs
Position
p42c:complement(103524..104465)
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AA seq
313 aa
AA seq
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MKRTYSQIDMDERRRIAGWRAAGLSATVIAEKLGRHRSTIFRELKRNAFEDPQMPDLSGY
YCVTANEMARERRAKLRKLARFSHVRQSVIERIIHGWSPQQIAGRMRLERHPICVSYETI
YKFAYSADGQAIKLWPHLPERRARRRSRHARRRHGRRFSPELNILHCPDTVAERKQFGHW
ECDLIQFRKKFGKANVTSLVERVSRFAVFLRNNDRQSKPIMDGLIEVLQPLPHAARRSIT
FHRGTEFSEWPYLQEYILFPSATCQKKQVEADRGQVDRGAPTPTHAARRPITFDRGTEFS
EWPYLQAGIETQT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacctactcgcagatcgacatggatgaacgtcgcaggatcgctggctggcga
gcagcgggcctcagcgccaccgtcattgccgagaagctcggccggcatcgctcgacgatt
ttccgcgagctcaagcggaatgcttttgaagacccgcagatgccggatctgagcggctac
tattgcgtcaccgccaacgagatggcccgtgagcgcagagccaagctgcgcaagctcgcc
cggttctcccatgtgcgccaatcggtgatcgaacggatcatccatggctggtcgccacag
cagatcgccggccgcatgcggctggagcgccatccgatctgcgtcagttatgagacgatc
tacaagttcgcctattccgcagacggtcaggccatcaaactgtggccgcacctgccggag
cggcgtgcgagacgcagatcgcggcatgcccgccggcgtcacggtcgccgcttcagcccg
gaactcaacatccttcattgtcccgatactgtcgccgagcgcaagcagttcggccactgg
gagtgcgatctcattcagtttcgcaagaagttcggcaaggccaacgtgacctcattggtc
gagcgggtcagccgttttgctgtcttcctgcgcaacaatgaccggcagtcgaagccgatc
atggacgggttgatcgaggtgctccaacccctgccccacgctgctcgacgctcaatcacc
ttccaccgaggcactgagttcagcgaatggccctatctgcaggagtacattctatttcca
agtgcgacatgccagaaaaaacaagtcgaagccgatcgtggacaggttgatcgaggtgct
ccaaccccgacccacgctgctcgacgcccaatcaccttcgaccgaggcactgagttcagc
gaatggccctatctgcaggctggcatcgaaacgcagacttga
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