Rhizobium etli CFN 42: RHE_PC00135
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Entry
RHE_PC00135 CDS
T00317
Name
(GenBank) probable peptide ABC transporter, substrate-binding-protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PC00135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PC00135
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_PC00135
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABC93341
UNAM_c:
RE1PC0000135
RhizoBase:
RHE_PC00135
UniProt:
Q2K1I1
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All DBs
Position
p42c:143800..145377
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AA seq
525 aa
AA seq
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MTREKDQSSPLSIGRRHFVGGAVALGALPVLTSGLLMPRDARAEAKRGGHLKLGLKGGAT
SDTLDPATYSASVLFVIGRLWGDTLVESDPKTGAPLPSLATSWTPSADASVWTFKIRNDV
QFHDGGKMTVADIVATLKRHADKNSQSGALGLMASITGIEEKAGDLILTLSEGNADLPLL
LTDYHLIIQPKGGLDKPAAAIGTGPYILKSFEPGVHATFEKNPKDWRSDRGFVDSIEILV
INDNTARVAALASGQVHFVNNVDPKTVPMLQRAPTVEILRNAGKGFYCFLMHCDTAPFDN
TDLRLALKYAIDRQAILDKVLGGYGVIGNDYPVNSNYALAPTDIEQRPYDPDKAAFHFKK
AGLDRSIQLLTSDAAFPGAVDAAILFQQSARKAGITIDVKREPEDGYWTNVWNKQPFCAS
FWGGRPTQDSRYSTSYLSTAEWNDTRFKRPDFDKLVLQARSELDEAKRKVLYRQLALMVR
DDGGLILPVFNDYIMASSKMLQGYVDDIGNDMSNGYIGSRVWLNA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtgaaaaggatcaatcttcgcctctgagtatcggccgccgtcacttcgttggc
ggtgccgtcgcgctgggtgctttgccagtcctcacctccggcctcttgatgccgcgcgat
gcccgcgcggaagcgaagcgcggtggtcatctgaaactcggtctcaagggcggggccacc
agtgatacgctcgaccccgcgacctatagcgcctcggtgttgttcgtgattggccgtctc
tggggcgacacccttgtcgaatccgaccctaagaccggggcgcccttgccgtcgctggcg
acttcctggacgccatcggcggacgcatccgtctggactttcaaaatcaggaacgacgtg
cagtttcacgacggcggcaagatgaccgtcgcggacatcgtcgcgacactgaaacgacac
gcggacaagaattcgcagtcgggcgctctggggctcatggcctcgatcaccggtatcgaa
gaaaaagctggcgaccttatcctcacactttcggaaggcaatgcggacctgcctttgctt
ttgaccgactatcacctgatcatccaaccgaagggcggcctcgacaagcctgcggcggcc
atcggtacaggtccttacattctgaaaagcttcgaaccgggcgttcacgcaaccttcgag
aaaaacccgaaggattggcgctccgaccgcggctttgtcgacagtatcgaaatcctcgtc
atcaacgacaacaccgcccgcgttgccgcacttgcctccggccaagtccatttcgtcaac
aatgtcgaccccaagacagtcccgatgctgcagcgagcaccgaccgtcgaaatcctccgg
aatgcaggcaagggcttctattgtttcctaatgcattgcgacacggctcccttcgacaac
accgatcttcggcttgcgctgaaatatgccatcgatcgtcaggcgatcctcgacaaggtt
ctgggcggctacggagtcatcggcaacgactatccggtcaattccaactacgccctcgcc
ccgaccgatatcgagcagcgcccttatgatccagacaaggccgccttccacttcaagaaa
gcgggtctcgaccgctccattcaactgctcacgtcagacgcagcctttccgggcgctgtg
gatgcggcgatcctgttccagcaaagcgcgcgcaaggccggcatcacgatcgacgtcaag
cgcgaaccggaagacggctactggaccaatgtctggaacaaacagcccttctgcgcctcg
ttctggggcggtcgtccgacccaggattcgcgctattccacctcttacctgtcgaccgca
gaatggaacgacacgcgtttcaagcgccctgacttcgacaaattggttctgcaagcaagg
tcagaactcgatgaggccaagcgcaaggtgctttatcggcaattggccctgatggtgcga
gacgacggcggtctgatcctgcccgtcttcaacgactacatcatggcctcttcgaaaatg
ctgcagggatatgtcgacgacatcggcaacgatatgtccaacggctacatcggcagccgt
gtgtggcttaatgcctaa
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