Rhizobium etli CFN 42: RHE_PD00104
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Entry
RHE_PD00104 CDS
T00317
Name
(GenBank) putative sugar ABC transporter, substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
ret02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PD00104
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RHE_PD00104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PD00104
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RHE_PD00104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Peripla_BP_1
Asp_Glu_race
Hpr_kinase_N
Motif
Other DBs
NCBI-ProteinID:
AAM54945
UniProt:
Q8KIL8
LinkDB
All DBs
Position
p42d:118412..119611
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AA seq
399 aa
AA seq
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MLRDTRGIKSVRIREITRAIILITGLVIPSVAAAGGLTELPREERKTYELLDPKLPTGES
VFRTFKAQRAPPWKIGYASTYADNSWRASILDEFTNKIVPAFKKAGLVSEFIVTQSNLED
AVQIRQMRQMVDDGVDAIIICCSNLTALNPTIEYAYSKGVPVFSYSGYVTSPFAVNATEN
NMQGGFEAAKWLAEEIEGSGNVLLVSGISGFASSDSFDVGAKKALEYYPEIKIVGHVDGK
WTDKVAQAEVQKFLAANPGRIDGIIVQSGAENGVINAVRQSGRDMIPIVLGGEASAACYW
RRNPDFVSKSFHFWPPRSEAGFVWDVMMRTLEGQGPKIQTILRPAIPSTIEDVMADLPAD
CDPNSEDWIEPKNTAWWSASAAAKYFDNPADPLSWKPAD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgctcagagacacgagaggtatcaaatccgtgcgcatacgtgaaattacaagagccatt
attctaatcaccggcttggtgatcccttctgtagcggccgccggtggccttacggaattg
ccgcgggaggaacgaaaaacctacgagttgctcgatccaaagttgcctacaggtgaatct
gtcttccgcacgtttaaggcacagcgagcaccgccgtggaaaattgggtacgcatcgaca
tatgctgacaattcttggcgtgcgagtattcttgatgagttcacaaacaagattgttcca
gctttcaagaaagcggggctggtctccgagttcatcgtcacccagtcaaatcttgaagac
gctgtccagatcaggcagatgcggcagatggtagacgacggcgttgatgcaattattatc
tgctgttcgaacctcacggcgcttaatcctacgatagagtatgcgtattcaaaaggagtg
cctgtgttctcgtactctggttacgtaacatcgccgttcgccgtcaacgcaactgagaac
aacatgcaaggcgggtttgaggcggcgaagtggctcgctgaagaaatcgaaggaagtggc
aatgtgcttctcgtttcggggatctccggctttgcctcctcggacagctttgacgtcggc
gcaaagaaggctctggagtattatcccgagataaagatcgtaggtcatgtcgacgggaag
tggacagacaaggtcgcgcaggccgaggtgcaaaaattccttgcagcgaatcccggtcga
attgatggtattatcgttcagtcgggagctgagaatggtgttatcaacgcggtgcgccag
tccgggcgcgacatgatcccaatcgttctagggggcgaagcttcggcagcctgttactgg
cgacggaaccccgacttcgtaagcaagagttttcatttctggccgccgcgctctgaggcg
ggtttcgtatgggacgtaatgatgcgaactcttgagggacagggccccaaaattcagaca
atcctgcggccagcaattcccagtaccatagaggatgtaatggcggatttgccagctgat
tgcgatcctaactctgaggattggatcgagccgaagaatacagcttggtggtctgccagc
gctgctgctaaatatttcgataacccagcggatccgctctcctggaagccggccgattga
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