Rhizobium etli CFN 42: RHE_PD00117
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Entry
RHE_PD00117 CDS
T00317
Name
(GenBank) probable sugar ABC transporter, substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
ret02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PD00117
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RHE_PD00117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PD00117
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RHE_PD00117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Peripla_BP_1
Asp_Glu_race
Hpr_kinase_N
Motif
Other DBs
NCBI-ProteinID:
AAM54933
RhizoBase:
RHE_PD00117
UniProt:
Q8KIM0
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All DBs
Position
p42d:132855..134024
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AA seq
389 aa
AA seq
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MLKKIVAALFTLSSLYHMNGVAKADGLDSLPPDQKALYENIDPAIPLGGTVYKDFVPKRP
PPWKIGYASTYAGNTWRANILDEFTNVLLPRYKEAGLVSDLIVTQSDLKDAVQIQQMRQM
VDDGVDAIVICCSNITALNKTIEYAHSKGVPVFSVSGYVTSPYAINATENNTDGGYKAAE
WLAKEIGEKGNVLMVSGIPGFASSDSFDIGAKNAFDKFPGIKIVGTIAGKWTDQVAQVEV
QKFLATNLAEVNGILVQSASENGVVNAVQQSGRDMMPIVLGGEASAACYWRKNPDFISKS
FHFWPPRSDARLVWDVMMRTLEGQGPKIQSILRPALPYTIDDVKEVLKEDCDPNSTDWIE
PKNNGWWPADVAANYFERPEDPLAWRPKK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaaaatcgttgcagcgctttttacgctgtcgagcctttatcacatgaacggc
gtggcgaaggctgacggcctcgattcgttgccgccggaccaaaaggcgctttacgagaat
atcgatcccgccattccgctcggggggacggtgtacaaagattttgttccaaaacgtcca
ccgccgtggaaaattggttatgcatccacatatgccggtaatacctggcgcgcgaacatc
ctggacgaattcaccaacgtattgcttccgagatataaggaagcaggcctagtctccgat
ctaatcgtcacgcagtctgacctcaaagacgctgtccaaatccagcagatgcggcagatg
gttgacgacggtgttgatgcgatcgtcatttgctgctcgaacattaccgcacttaacaag
accatagagtatgctcattcgaaaggcgtgccagtcttctcagtctcgggctatgtcaca
tcaccctacgcaatcaatgccacagagaataacaccgacggtggctacaaggctgctgaa
tggcttgccaaggaaatcggtgaaaaaggcaacgtcctgatggtatcgggcatccccggt
ttcgcatcatcggacagcttcgacatcggcgcgaagaacgcgttcgataaattccccggt
atcaaaattgtaggcacgatagctggcaaatggaccgaccaggtcgcccaggttgaggtt
cagaagtttcttgccaccaatcttgctgaggttaatggcattctcgttcagtccgcttca
gaaaacggtgtcgtgaacgcagtacagcaatccggccgcgacatgatgcctatcgtgctc
gggggtgaggcttcggcagcctgctactggcgtaagaaccctgatttcataagcaagagc
ttccatttctggccgccgcggtctgatgcccgccttgtgtgggacgtcatgatgcgaacg
cttgaaggccagggaccaaagatccagtcgattcttcgtcctgcgcttccttacaccatt
gatgacgtgaaggaagtgctgaaggaagattgcgatcccaattccacggattggatcgag
ccgaagaacaacggctggtggcctgcagacgtcgctgcaaactacttcgaacgtcctgaa
gatccgttagcttggcggccgaagaagtaa
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