Rhizobium etli CFN 42: RHE_PD00178
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Entry
RHE_PD00178 CDS
T00317
Name
(GenBank) nopaline ABC transporter, substrate-binding protein
KO
K10018
octopine/nopaline transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PD00178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PD00178
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
RHE_PD00178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan-Glu_bd
PGP_phosphatase
Motif
Other DBs
NCBI-ProteinID:
AAM54873
RhizoBase:
RHE_PD00178
UniProt:
Q8KL78
LinkDB
All DBs
Position
p42d:complement(195203..196045)
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AA seq
280 aa
AA seq
DB search
MKRTLLLALSLVVCANNAGAMDRKTLTIASEGASPPWNAITPQGELAGFDIDVGRDLCRR
MKFECTFVPQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIAFSKPYAGGFNQVVIRKDL
NLPPTDTLAELDLTTIDPEKQAKIEELRAALNGRTLGVLRSSNSEAVLNELFGKVATIRS
YDSQDNMHLDLVAERIDGGLADYFTWKAFLDSTDGGIATLYGPRLSGGLWGPGVGVGLRQ
DDGELVAAFDSAIEAATSDGTLKRLSEQWFKIDVSPQTSN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgaacacttctgcttgccctgtctcttgtcgtctgcgccaacaacgcgggagca
atggacaggaagacactgacaatcgcctctgaaggtgcttcgccgccctggaatgccatc
accccccaaggggagctcgccggctttgacatcgacgtcggccgcgatctttgccggagg
atgaagttcgagtgcactttcgtgcctcaggactgggacggaatcataccggcgctcacc
gttggaaagttcgatgccatcatgtcggggatggcgataactgagaagcggaagaaatct
atcgctttttccaagccctacgccggaggtttcaaccaagttgtcatacgcaaagatctc
aatcttccgcccacggatacgttggccgagctcgacctcacaactatcgaccctgaaaag
caggcaaagatcgaggagcttcgagccgctctcaacggcagaactttgggcgtattgcga
tcatcgaattcggaagcggtgctcaatgaactgttcggaaaggtcgcgacgatcaggagc
tacgattcccaggacaacatgcatctcgatctcgtggctgagcgcatcgatggcggtctt
gccgactatttcacctggaaagccttcctcgacagcacggatggcgggattgcgacgctc
tacggcccgcggctctccggtggcctgtggggcccgggtgtcggcgtcgggctccggcaa
gatgacggcgaactggttgcggcattcgatagcgccatcgaggccgccacgagcgacgga
accctgaagcggctgagcgagcaatggttcaagatcgatgtttcgccgcagacatcgaac
tag
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