Rhizobium etli CFN 42: RHE_PD00179
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Entry
RHE_PD00179 CDS
T00317
Name
(GenBank) nopaline ABC transporter, permease protein
KO
K10019
octopine/nopaline transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PD00179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PD00179
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
RHE_PD00179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF6338
Motif
Other DBs
NCBI-ProteinID:
AAM54872
UniProt:
Q8KL79
LinkDB
All DBs
Position
p42d:complement(196103..196852)
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AA seq
249 aa
AA seq
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MSMTIALEAFLTLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLAYTYAF
RGTPLLVQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVVRGGIQA
VPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTG
LARQLVSETFAPYEVFIAAGAFYLLLTLLITQGFQMLETRWTPTANRPPPAQPVPRRANG
KPPLASAET
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaccatcgcgcttgaagcgtttctcacccttccccgcggccttcttctcact
ctggttctgacattcgcatcgcttgccgcaggcttcgccgtctcggtcccgctcgccttc
ctacgggcatcatcaaatccgtgggcttccgcgcccgtgctggcatatacctatgcgttc
cgcggcacgccacttctggttcagcttttcctgatttactacgggattggccagcttccc
ctcgtccgccaaagctttctatgggccgtgatgcgagagccgttctggtgcgccttcatt
gctttcaccctgaacagcgccgcccatacgacagaagttgtgcgcggcgggatccaggcg
gtcccgcgtgggcagattgaagcggccaaagccttgggcctttcccgtttccacactgcc
cgtcttatcgtgttccctttgaccctcaggatcgctcttcccgcctatgcaaatgaggtg
gttggaatgctgaaggcaagctcccttgcaagcaccatcacgctgcttgaggtgaccggg
ctcgcccgacagctggtgtcggagacattcgccccatacgaggtcttcattgccgcgggg
gctttctatctgctgcttaccctcttgatcacgcaaggtttccagatgctggagacgcgt
tggacgccgacggcaaaccgtccaccgccggcgcaacctgtacctcgaagagcgaacgga
aagccgcctctcgcctcggctgaaacttga
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