Rhizobium etli CFN 42: RHE_PD00332
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Entry
RHE_PD00332 CDS
T00317
Name
(GenBank) probable protein secretion protein, HlyD family
KO
K20345
membrane fusion protein, peptide pheromone/bacteriocin exporter
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PD00332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PD00332
Transporters [BR:
ret02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RHE_PD00332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AAM55062
RhizoBase:
RHE_PD00332
UniProt:
Q8KKR3
LinkDB
All DBs
Position
p42d:346905..348086
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AA seq
393 aa
AA seq
DB search
MAPSDYRLAVPLSAETASCIAESILARRSGRSLSIYRAILLFVAAAFGSLPLVTIPVSMQ
SVGTIRPIVEKTPLIAPVSGRISRVLAFENDVVAKGKEIIAFDDHVIEEKLSGVLADIHA
KSDLAHDFQTLISSGARLSVSPPLQTESATAERVHFLNLLRENQNARSNAAAELDRAKRL
VSAAAAPAKTVDEKAFALQNIEVQGEILVRRKTADWNQKLLDANLRLKELTATLHQLEHE
RDLHRIRAPVSGALEQFSGLAHGSYVQSGQTVGWISPNDDLVAEIYVSPNDIGFVQPGQP
VRLQVDAFNYNQWGVIKARVVEVAQDFTLHDGNPVFKVQCALSRSELALKSGAIGHLKKG
MTVRARFLLANRTLLQLLYDEADDWLNPMLAGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctcctagtgactacagactagcagttcccctttctgctgaaacggccagctgcatc
gcagaaagcatactggcgcgacgatcaggacgatccttgagcatttatagggcgatcttg
ctcttcgtcgccgcggcatttggctcactgccactcgttaccataccggtctccatgcag
agtgtcggtactattcgcccgatcgtggagaagacgcccctgatagcgcccgtctccgga
cgcatctcccgtgtccttgcctttgagaacgatgtcgttgctaaggggaaggaaataatc
gcctttgacgatcatgtaatcgaggaaaagctcagcggggttttagccgacattcatgcc
aagagcgatcttgcccatgacttccaaacgctgatttcttccggcgcaaggctcagcgtc
tcgccccccctccaaaccgaatccgcgacggctgaaagggtgcattttctcaacttgctg
cgcgagaaccaaaatgcgcgcagtaacgccgcggcggaactcgaccgcgcaaagcgactt
gtctcggctgctgcggcgccggcgaagaccgttgacgagaaggctttcgctctccaaaat
atcgaggtccaaggcgagatcctcgtgcgacgcaaaaccgctgattggaaccagaagctc
cttgatgctaacctgcgcttaaaggaactcacggccaccttgcatcagctcgagcacgaa
cgggacctgcaccgcatccgcgccccagtatcgggtgctctcgagcagttctccggcctc
gcgcacggaagctacgtgcagagcgggcaaaccgttggttggatctcgccgaacgacgat
ctggtggcggaaatctacgtctcccccaacgacattggctttgtgcagcctggtcagccg
gtgcggctccaagtggatgcctttaactacaaccaatggggtgtcatcaaagcaagggtg
gtcgaggtggcgcaggacttcactctgcatgacgggaacccggtcttcaaggtccagtgc
gcgctctctcgcagcgaactcgcgctgaaaagcggggccatcggccacctgaagaaaggc
atgaccgtgcgggctcgctttctgttggccaatcgcactctcctgcaactgctctacgac
gaggcagacgattggctcaacccgatgctggcggggcgctaa
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