Rhizobium etli CFN 42: RHE_PD00333
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Entry
RHE_PD00333 CDS
T00317
Name
(GenBank) probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PD00333
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PD00333
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ret01002
]
RHE_PD00333
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PD00333
Peptidases and inhibitors [BR:
ret01002
]
Cysteine peptidases
Family C39
RHE_PD00333
Transporters [BR:
ret02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RHE_PD00333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_16
AAA_29
Zeta_toxin
RsgA_GTPase
AAA_23
AAA_30
AAA_25
nSTAND1
AAA_24
DUF87
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAM55061
UniProt:
Q8KKR4
LinkDB
All DBs
Position
p42d:348114..350261
Genome browser
AA seq
715 aa
AA seq
DB search
MSSKAIKFKQRDITDCGAASLASVAAFYGYKLPLARIRQYASTDRSGTSVLGLTEAAQKL
GFIAKGVKGGFDSLYKIPKPAIAHVVKEDLHHFVVVHAIDAKWVIVMDPALGEICKVPHQ
EFMEQWTGVLVLLVPADTFNRRDETTSPLARFARLLAPHRTVMAQALVGALVTTVLSLST
AIYVQKIVDHVIPAGNRNLLNLMSIAMLLILAIQILINLLRGRLVLQTGQKIDVCLILGY
YNHILALPQKFFDSMRMGEIVSRMNDAVKIRSFLNDVSINMFVDILMILFSFGMMFIYSW
NIALIVALAIPMYILVYWAINRMNRNLQRVIMENDAKLEAQLVESLGAVSTIKTSGVESF
ANFKMETRFVKMLHSVYSSGLISICGDNASTLLSVLFTIVLMWFGTTLALEQAVTPGELL
SCYTLLGYITRPVARLIQTNRIVQDAFIAADRLFEIFELESASSSGIDATKTDLGDIRLE
NVTFRYGAQAEVFSDLSVSFRQGELTAVVGESGSGKSTLAALLQNVYQLEDGCIRIGQYA
LQDFSSASLHKVMAAVPQSIDVFSGSVIENIALGEFEPEFDKIVRICDRIGLRECIERWP
GRFQAHLGENGVRLSGGEKQRLALARALYRDPDVLILDEATSSLDSAAEEFVLRVVEDLS
RAGKTIIVITHRLSTVRGADNIVVLDKGRVIEEGKHADLVRTDGPYARLWRAPRS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaggccattaagttcaaacagcgtgacatcacggattgcggcgccgccagc
ctcgcatctgtcgcagccttctatggctacaagttgccattggcgcgcatccgccagtat
gcgtcgaccgaccgctccggtacgagtgtgctggggctcacggaagcggcgcagaagctg
ggcttcatcgcgaaaggcgtcaaaggtggcttcgacagcctgtacaagatccccaagccc
gctatcgcgcacgtcgtcaaggaggacctgcaccatttcgtagtggtccatgcgatcgac
gccaagtgggtcatcgtcatggacccggccttgggcgaaatctgcaaagtgccgcatcag
gaattcatggagcaatggaccggcgttctggttttgctggttccggcagacacattcaat
cgtcgagacgagaccacgtcgcccctcgcccgattcgcccgcctactcgcgccacaccgc
acggtgatggcgcaggctctcgtcggcgctcttgtgacgaccgtcctcagtctctcgacg
gcgatctacgttcagaagatcgttgatcacgtgatcccagcgggaaaccgcaacctgctc
aacttgatgagcatcgcaatgctgctgatcctagcgatacagatcctgatcaacctccta
agaggccgactcgtcctgcagacggggcagaagatcgacgtatgcttgatcctcggctat
tacaatcacatcctggccctgccccagaagttcttcgatagcatgcgcatgggagaaatc
gtgtcgcgcatgaacgacgctgtgaaaatcaggagcttcctgaacgacgtttcgataaac
atgtttgttgacattttaatgatactgttctcgttcggaatgatgttcatctattcctgg
aatattgctttgatcgtggcgctcgccattccaatgtacatcctggtatattgggccatc
aatcggatgaatcgaaatctccaacgagtcatcatggaaaatgacgccaaactcgaggcg
caactggtagaatcactcggagctgtctccaccattaagacttccggcgtcgagagcttc
gcaaacttcaaaatggagacccgcttcgtaaagatgctgcattccgtctacagctccggg
ctgatctcaatctgcggcgacaacgcctcgacgttgctgtcggtcctgttcaccatcgtg
ctgatgtggtttggaaccacgcttgcgctcgaacaggccgtcacgcccggcgaattgctg
tcctgctatacgttgcttggctatatcacccggccggtcgcccgcctgatccagaccaac
cggatcgttcaagacgcgtttatcgcggcggatagacttttcgagatctttgaactggag
tcggcaagcagcagcggcatcgatgctacgaagaccgatctcggagatattcgcctggag
aacgtcacattccgctatggcgcgcaggcggaggttttcagcgatctaagcgtctccttt
cgccaaggagagttgacggccgtcgtgggtgagagcggctcgggcaaaagcacccttgcg
gctctgctgcagaatgtctaccagcttgaggatggatgcattcggatcggccaatatgcc
ctccaggatttctcgagcgcatcactgcacaaggtcatggctgcagtaccgcaatcgata
gacgtcttctccggttccgtgatcgagaacatcgccctgggcgagttcgaaccggagttc
gataagatcgtacgcatctgtgatcgaataggactgcgggagtgcatcgagcgctggccc
gggcggttccaggcccatctgggcgagaacggggttcgcctctccggaggtgagaagcag
cgcctcgcattggctcgggccctgtaccgggatcccgacgttctaatccttgacgaagcg
acctcctctctggactcggcagccgaagaatttgtgctgcgggttgttgaggatctgtct
cgcgctgggaagaccatcatagtcatcactcatcggttgagcaccgttcgtggggcggac
aatattgtggtcctggacaaggggcgggtcattgaggagggaaagcacgctgacctagtg
agaactgatggcccttacgctcgattatggcgggcgccaaggtcgtga
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