Rhizobium etli CFN 42: RHE_PE00009
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Entry
RHE_PE00009 CDS
T00317
Name
(GenBank) probable penicillin-binding protein
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00550
Peptidoglycan biosynthesis
ret01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHE_PE00009
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ret01003
]
RHE_PE00009
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
RHE_PE00009
Enzymes [BR:
ret01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RHE_PE00009
Glycosyltransferases [BR:
ret01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RHE_PE00009
Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RHE_PE00009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ABC93448
UNAM_e:
RE1PE0000009
RhizoBase:
RHE_PE00009
UniProt:
Q2K003
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All DBs
Position
p42e:complement(9671..11752)
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AA seq
693 aa
AA seq
DB search
MRLWRKFAIGSAAGILLAGAAMLALDAADKAFPPPLDRADTVSPEVLDADGQLLRAFATG
EGRWRLKTTVADVDPQFLRMLVAYEDQRFYDHGGVDAWALGRASLQFIRNGRIVSGASTL
SMQVARLIEPRAERSFSAKLLQLVRAVQTERRLSKEEILDLYLTHAPYGGNLEGVRAASL
AYFGKEPRRLTVAEAALLVALPQLPERRRPDRNLKAAQEARKRVLDRAAVAEAVGDGEAE
RAEAVAIPPRRLQLPALAAHLAEAALRKEPAILKHQTTLKKPVQQGLEQVARAATMKLGP
KLSLAMVMADAQTGAIVGEVGSADYFDASRSGWIDMTRVNRSPGSTLKPFIYGLAFEQGL
VSQETIIEDRPADFFGYRPRNFDMSYQGDVTVREALQLSLNVPAVKLLDAVGPSRLLVRF
RRAEVRPALPANETPGLAIGLGGVGITLKDLVQLYTALADRGQPARLGDGITGTPGKLDG
EPLLEPVAVWNVADILSGVIPPAGAPQRGIAYKTGTSYGYRDAWSVGYDGRFVLGIWVGR
PDNSAVPGLTGYGTAAPILFEAFAKSGIATTPLPRPPAGAVRIAQSELPISQRRFALNAS
GLLVASGREPAPQIVYPPEGAHIDLGAKGGDLSPLMLKLQGGRAPFRWLANGKPLPDLSR
RRTQQWQPDGGGYSKLTVIDSAGRAASVGVFID
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgtggcgcaagtttgcgatcggctccgccgccggcattcttcttgccggcgcg
gccatgcttgcgctcgacgccgccgacaaggcttttccgccgccactcgacagggcggat
acggtttccccggaagtgctggatgccgacgggcagttgctgcgcgccttcgcgaccggt
gaaggccgctggcggctgaagacgacggtcgccgatgtcgatccgcagttcctgcgcatg
cttgttgcctatgaggatcagcgtttctacgatcacggcggcgtcgacgcctgggccctc
gggcgggcgagcctgcaattcatccgcaatggccgcatcgtttccggcgcctcgacgctg
tcgatgcaggtggcgcggctgatcgagccgcgagcggaacgctcgttttcggcaaaactt
ctgcagctcgtccgcgcggtgcagaccgaacggcggctgtcaaaggaagagattctcgat
ctttatctcacccatgcgccctatggcggcaatctcgaaggcgtgcgcgccgcaagtctc
gcctatttcggcaaggagccgcgacgcctgacggtcgccgaagccgccctgctcgtcgcc
ctgccgcaattgccggaacggcgccggccggatcgtaatctgaaggcggcacaggaggcg
cgcaagcgcgtgctcgatcgcgccgcggtggccgaggcggtcggcgacggtgaagcggag
cgggccgaagctgtcgccataccgccgcggcgcctgcagttgccggccctcgccgcccat
ctcgctgaagccgcgctgcgcaaggagccggcgatcctcaagcaccagacgaccttgaag
aagccggtgcagcaggggctggagcaagtcgcccgtgccgcgacgatgaaactcgggccg
aagctttcgctcgccatggtgatggccgatgcccagaccggcgcgatcgttggcgaggtc
ggttcggccgattattttgacgccagccgctccggctggatcgacatgacacgcgtcaac
cgctcgcccggatcgacgctcaagcccttcatctacgggctcgccttcgaacagggcctc
gtgtcccaggagacgatcatcgaagatcggcctgccgatttcttcggctaccgcccgcgc
aatttcgacatgagctatcagggcgatgtcaccgtgcgcgaggctttgcagctctccttg
aacgtgccggccgtcaagctgctcgatgccgtcgggccgtcacggctgctggtgcgtttc
cgccgcgccgaggtgcgccctgccctgccggcgaacgaaacgccgggactggcaatcggt
cttggcggcgtcggcatcacgctcaaggatctggtgcagctctatacggcgctcgccgat
cgcggtcagccggcaaggctcggcgatggcatcaccggtacacctggcaagctcgacggc
gaaccgctgctcgagccggtcgcggtttggaacgtcgccgatattctctccggcgtcatc
cctcccgccggcgcgccgcagcgcggcatcgcctataagaccggcacgagctatggctat
cgcgacgcctggtcggtcggttatgacgggcgttttgttctcggcatctgggtcggccgg
cccgataacagcgccgtcccgggtctgaccggctacggcaccgcggcaccgatcctgttc
gaggcttttgccaaatcaggtattgcaacgacgcccctgccgcgcccgccggcgggcgcc
gtgcgcatcgcccaatcggagcttccgatcagccagcggcgttttgccctcaacgccagc
ggcctgctcgtcgcctccggccgcgaacccgcgccgcagatcgtttatccgcccgaaggc
gcccatatcgatctcggtgcaaaaggcggcgatctgtcgccattgatgctgaagctgcaa
ggcggccgtgcgcccttccgctggcttgccaacggcaagcccttacccgatctctcgcgc
cggcgcacgcagcaatggcagcccgatggcggcggctattccaaactgaccgtcatcgat
tcggccgggcgcgccgcaagtgtcggcgttttcatcgactga
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