Rhizobium etli CFN 42: RHE_PE00289
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Entry
RHE_PE00289 CDS
T00317
Name
(GenBank) probable sugar ABC transporter, substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PE00289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PE00289
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RHE_PE00289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Asp_Glu_race
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ABC93724
UNAM_e:
RE1PE0000289
RhizoBase:
RHE_PE00289
UniProt:
Q2K0S9
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All DBs
Position
p42e:complement(324051..325046)
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AA seq
331 aa
AA seq
DB search
MKLAKTLALGVALAVAMMAGTASAKDIKIGLVVKSLGNGFFDAANKGAQEAAKELGGVEV
IYTGPTSTTAEGQIEVINSLIAQGVDAIAVSANDPDALVPALKKATQRGIKVISWDSGVA
PEGRILQLNPSSNELIGKMCLTLAKDHLEGGKGDFAILSATTTSTNQNIWIDQMKKQLKD
FPGLNLVTTVYGDDLSDKSYREAEGLLKSNPNVKVIVAPTTVGVLAASKVVEDKGLVGKV
YVTGLGLPSEMAGAIKSGATKEFAIWNPIDLGYSATQIAYRLVKGETDGKPGSEINAGRM
GKIKVGDNGEAAMADPFVYNASNIDQFSKVF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcaaagacacttgcgctcggcgtagcgctcgccgtcgccatgatggccggc
accgcaagcgccaaggacatcaagatcggcctcgtcgtcaagtcgctcggcaacggcttc
ttcgacgccgccaataaaggcgcccaggaagccgccaaggagctcggcggcgtagaggtc
atctacaccggtccgacgtcgacgacggcagaaggccagatcgaagtcatcaactcgctg
atcgcccagggcgttgatgccatcgccgtttcggccaacgatcccgacgcgctggttccg
gcgctgaagaaggcgacccagcgcggcatcaaggtcatctcctgggattccggcgttgcc
cccgagggccgtatcctgcagctcaacccgtcgtccaacgagctgatcggcaagatgtgc
ctgacgctcgccaaggaccatctcgaaggcggcaagggcgacttcgccatcctgtcagca
acgaccacctcgaccaaccaaaatatctggatcgaccagatgaagaagcagctcaaggat
ttcccgggcctcaacctcgtcaccacggtttacggcgacgacctttcggacaagtcctat
cgtgaagccgaaggcctcttgaagtcgaacccgaacgtcaaggtcatcgtcgctccgact
accgtcggcgttcttgccgcctccaaagtcgtcgaagacaagggccttgtcggcaaggtc
tacgtcaccggcctcggcctgccctccgagatggccggcgcgatcaagtcgggcgcgacg
aaggaattcgccatctggaacccgatcgacctcggctactccgccacccagatcgcctac
cgcctcgtcaagggcgagacggatggcaagccgggcagcgagatcaatgccggccgcatg
ggcaagatcaaggtcggcgacaacggcgaagccgccatggccgatcccttcgtctacaat
gcttcgaacatcgaccagttctccaaggtcttctga
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