Rhizobium etli CFN 42: RHE_PF00045
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Entry
RHE_PF00045 CDS
T00317
Name
(GenBank) probable sucrose ABC transporter, ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PF00045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00045
Transporters [BR:
ret02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RHE_PF00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
Zeta_toxin
APS_kinase
AAA_30
MMR_HSR1
AAA_18
RsgA_GTPase
AAA_33
3HBD
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ABC93939
UNAM_f:
RE1PF0000045
UniProt:
Q2JZP7
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All DBs
Position
p42f:46008..47771
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AA seq
587 aa
AA seq
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MTVLLHFISMFRGVLIALALCSMVFEVINLTIVWGLSVIVDGVTQQGAAAFLRSEWPLLT
VLGLLIFPVMPIVSFVLNTLNSHTLRIAMPAAIQWQGHKAVERQDIAFFHDLYAGQVSSR
LQQVSSAVQQQILAGFQSIPRFLMQLVGSVILLSALAWQLALPVVVWIVLNVAFTARIVP
IFVERSRRTAKQRSLVAGAITDLYTNMQMIKQFAAEDSEAGAIRRIIRKAVHTQHAEQRI
YRSSEVTVVILNTLLWLTMLAIGFSGLVRGFLTVGEFVGAVYILNRLSTQIYVFMQMGQQ
IFQAIGTIKDAMPVMTTPPTITDRPGATELTVQQGEIRFENVRFAYKSGKPVIDKLSLTV
RAGEKVGLVGLSGAGKTTLANLLLRFYDLTGGAILIDGQDIRAVTQASLRRAIGVIAQDV
ALLHRSVGDNIRYGRPGATQEEIERVTKMASADAFIADLTDSEGRKGYDAFVGDRGIKLS
GGQRQRVAIARVLLKDAPILVLDEATSALDSESEAAIQERLNLVMDGKTVIAIAHRLSTI
ARMDRIVVLDHGRIVEEGRPEELVERDGLFARLWRRQTGGFIPEEID
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtgctgctgcatttcatctcaatgtttcgcggcgtgctgattgcgctggcgctt
tgctccatggtgttcgaggtgataaacctgacgatcgtctgggggctctcggtcatcgtc
gacggcgttacgcagcagggtgctgccgccttcctgcgcagcgaatggccgctgctgacc
gttctcggactactgatctttcccgtgatgccgatcgtatccttcgtgctcaatacgctg
aactcgcatacattgcgcatcgccatgccggccgccatccagtggcagggccataaggcc
gtggagcggcaggatattgccttcttccatgatctttatgccggccaggtttcctcgcgg
ctgcagcaggtctcctccgccgtccagcagcagattctcgccggcttccagtccattccc
cgcttcctgatgcagctggtgggctcggtgattttgctcagcgcgctcgcctggcagctc
gctttgcctgtggtcgtctggatcgtgctcaacgtcgccttcaccgcgaggatcgtgccg
atcttcgtcgagcgctcgcgccgcaccgccaagcagcgcagcctcgtcgccggcgccatc
accgatctctataccaacatgcagatgatcaagcagtttgccgccgaagacagcgaggcg
ggcgccatccgccgcattatccgaaaggccgtgcacacgcagcatgccgagcagcgcatc
taccgctcgtcggaagtgaccgtcgtcatcctcaacacgctcttgtggttgaccatgctg
gcgatcggattttcaggtctcgtcagaggcttcctcacggtcggcgagttcgtcggcgcg
gtctatattctcaaccggctgtcgacgcagatctacgtcttcatgcagatgggtcagcag
atcttccaggcgatcggcacgatcaaggacgccatgcccgtcatgacgacgccgcccacc
atcaccgaccggccgggtgcgaccgaacttacggtacaacagggcgaaatccgtttcgaa
aacgtccgtttcgcctacaagtcaggcaaacccgtcatcgacaaactgtcgctgacggtc
cgggccggtgagaaagtgggcctcgtcggcctctccggcgccggcaagacgaccctcgca
aacctgctcctgcggttttacgacctcacgggcggcgcgatcctgatcgacgggcaggat
atccgcgcggtgacgcaggcaagccttcgccgcgcgatcggcgtcatagcccaggatgtt
gccctgctgcaccgttcggtcggtgacaatatccgctacggccggccaggagcgacgcag
gaagaaatcgaaagggtgacgaagatggcgagcgccgatgccttcatcgctgatctcaca
gacagcgaaggccgcaagggttatgacgccttcgtcggcgaccgcggcatcaaactgtca
ggcggccagcgccagcgtgtcgccatcgctcgcgtgctgttgaaggacgcgccgatcctg
gttctcgacgaggcgacctccgccctcgatagcgaatccgaagccgccatccaggaaagg
ctgaatctcgtcatggacggaaagactgtgatcgccatcgcccaccgcctctcgacgatt
gccaggatggaccgaatcgtcgtgctcgatcacggacgcatcgtggaagaaggccggccg
gaagaactggtcgaacgggacgggctgtttgcccggctgtggaggcgccagaccggcggc
ttcattcctgaggaaatcgattga
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