Rhizobium etli CFN 42: RHE_PF00087
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Entry
RHE_PF00087 CDS
T00317
Name
(GenBank) probable transcriptional regulator protein, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ret03000
]
RHE_PF00087
Transcription factors [BR:
ret03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RHE_PF00087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
LacI
Motif
Other DBs
NCBI-ProteinID:
ABC93980
UNAM_f:
RE1PF0000087
UniProt:
Q2JZK6
LinkDB
All DBs
Position
p42f:complement(87772..88719)
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AA seq
315 aa
AA seq
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MTASRALRGAADVSKETREKVLQQAERLNYLGNRLALSLSSQRTNLVAVVVPSMSNIVFP
EMLAGISAGLRGSGMQAVFGISDYDMAKEREIIRDMLSWRPAAIIVTGLDQPAETVRMLQ
NAAIPVIQLMDLDGTPIDFNVGLSHGKAGEEMAKALLAAGRRRFGYIGSAIDRDLRAGKR
KAGFEKVLRESGLSFVDERFNAAYSSVAHGKRLSLSMLAATRDLDCIYYSNDDMATGGAF
ACLELGISSPAEILIAGFNGLDVASALPFRIATSISPRRQMGEVAAALLLAASSGEGNEI
SEKIIAFTPEITGVD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcgcgcgcccttcgcggggccgccgatgtttccaaggagacgcgcgaaaaa
gtgctccagcaggccgagcggctaaactatctcggcaaccggttggcgctctcgctgtcg
tcgcagcgcaccaacctcgtcgctgtcgtggtccccagcatgtccaacatcgtctttccc
gaaatgttggcggggatttctgccgggctgcgcggatccggaatgcaggcagtcttcggc
atctccgactatgatatggcgaaggaacgcgagatcattcgcgacatgctctcctggagg
cctgccgccattatcgtcacaggtctcgatcagcccgcagaaactgtcagaatgctgcag
aatgcagccatccccgtcattcagctcatggacctagacggcacgccgatcgatttcaac
gtcggcctttcgcatggcaaggctggagaagagatggcaaaagcgctgttggccgccggc
cgacggcggttcggctatatcggcagcgcgatcgacagggatttgcgcgccggcaagcga
aaagccggcttcgagaaggtgctgcgcgagagcggcctctctttcgtggatgagcggttc
aacgccgcctattcctcggtggcgcacggcaagcggctatcgctgtcgatgcttgcggcg
accagggacctcgactgcatctattattccaacgatgacatggcgacgggcggcgccttt
gcctgtctggagctcggcatttccagccccgcggagatcctgatcgccggattcaatggg
ctcgatgtcgccagcgccctccccttcaggatcgcaacctcgatttcaccacggcgtcag
atgggcgaagtcgccgccgcgcttctgctcgctgcgagtagcggtgaaggaaacgaaata
tccgaaaaaattattgccttcactccggagataaccggcgtggattga
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