Rhizobium etli CFN 42: RHE_PF00189
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Entry
RHE_PF00189 CDS
T00317
Name
(GenBank) probable transcriptional regulator protein, AsnC family
KO
K15782
Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ret03000
]
RHE_PF00189
Transcription factors [BR:
ret03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RHE_PF00189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
HTH_CodY
MarR
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ABC94080
UNAM_f:
RE1PF0000189
UniProt:
Q2JZA6
LinkDB
All DBs
Position
p42f:199438..199935
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AA seq
165 aa
AA seq
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MKLDAIDLRILDAVQHDGRITKLALAEKAGLSPTPCWMRLRKLEKAGIITGYHARIAPRR
IAPVASVMMEVTLANHRQADFERFERAVAATPEIVACWSVGGGVDYILKIIAADIDAYQR
LVDSLLDRELGIDRYFTYIVTKTVKEETVLPVSSFAASGEDQSAS
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgacgccatcgacctgcgcatcctcgacgccgtccagcacgacggccgcatc
accaagctggcgctggccgaaaaggccgggctgtcgccgacgccgtgctggatgcggctg
cgcaaactcgaaaaggcagggatcattaccggctaccacgcccggatcgccccgcggcgc
attgcgccggtggccagcgtgatgatggaagtaacgctcgccaatcatcgccaggccgat
ttcgagcgcttcgagcgtgccgttgccgcaacccccgagatcgtcgcctgctggtcggtc
ggcggcggcgtcgactatatcctgaaaatcatagcggccgatatcgacgcctatcagcgg
ctggtcgacagtcttctcgaccgcgaactcggcatcgaccgctatttcacctacatcgtc
accaagacggtgaaggaggaaacggtgcttcctgtctcttccttcgccgcatccggcgag
gaccagagcgcgtcgtag
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