Rhizobium etli CFN 42: RHE_PF00215
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Entry
RHE_PF00215 CDS
T00317
Name
(GenBank) probable D-ribose ABC transporter, permease protein
KO
K10440
ribose transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PF00215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00215
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RHE_PF00215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ABC94106
UNAM_f:
RE1PF0000215
UniProt:
Q2JZ80
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All DBs
Position
p42f:complement(227527..228552)
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AA seq
341 aa
AA seq
DB search
MIKKDLGLLLLIVVVGVVVAIINPRFLLPINLANTANLIGLFGILSMGQAFVIITGGIEL
SVGSLVALLGVLFVDFIAVQYMPWTLALPLILLLGAVMGAVHGWLITRLNLQPFVVTLCG
LLIYRGAARFYTADGTAGFAFGQNFPELEFLTAGRFYGIPSTFIAMVVIAVAMWLVLHRS
VFGRYLYAVGKNEEAARYSGIRTDRLVMTAYVICGLLTALSAIYFAMYTRSISPASHGQF
YELYAIAAAVLGGFSLRGGEGSIVGVVLGTVLLQELQNLVNLLGIPSSLNFAVMGGVILM
GVLIDQQWHSIRAKRRLVSAARQTESRLPNEGSLPVVANRD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaagatcttggactgctgcttttgatcgtcgttgtcggcgtcgtggtcgcc
atcatcaacccgcgcttcttgctgccgatcaaccttgccaacaccgccaacctgatcggt
ctgttcggcatcctgtcgatgggccaggcctttgtcatcattacgggcggtatcgagctt
tcggtgggctcgctcgtagcgcttcttggcgttttattcgtcgatttcattgcggtacaa
tatatgccctggacgctggcactgccgctcattctcctgctcggcgcagtcatgggcgcc
gtccacgggtggctcatcacccggctcaacttgcagccctttgtcgtcactctttgcggc
ctcctgatctatcgcggggcagcgcgcttctatacggccgacgggacggcgggatttgct
ttcggccagaatttcccggagctcgagtttctgaccgccggacggttctatggcattccg
agcaccttcattgctatggtcgtcattgccgtggccatgtggctggtgcttcatcgctct
gtcttcggacgttatctttacgcggttggaaaaaacgaagaggcggctcgctattcaggt
atccggactgaccgtttggttatgacggcctatgtcatctgcggactgcttacggcgctt
tcggcgatctatttcgccatgtacacgcgctcgatctcgccggcgagccatggccagttc
tacgagctctacgcgatcgccgccgccgtgctcggcggcttttcacttcgcggcggtgag
ggatcgatcgtcggggtcgtgctgggcacagtcctgctgcaagagttgcaaaaccttgtg
aacctgctcggcattccctcgtcgctgaacttcgccgtcatgggtggcgtgatcctcatg
ggagtcctgatcgaccaacaatggcattcgatccgcgcaaagcgacgcctcgtctccgcc
gcacggcagactgaatcccgtcttccaaacgaaggaagcttgccggtggttgctaatcgg
gactaa
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