Rhizobium etli CFN 42: RHE_PF00232
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Entry
RHE_PF00232 CDS
T00317
Name
(GenBank) probable oligopeptide ABC transporter, permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PF00232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00232
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_PF00232
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ABC94122
UNAM_f:
RE1PF0000232
RhizoBase:
RHE_PF00232
UniProt:
Q2JZ64
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All DBs
Position
p42f:complement(246252..247373)
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AA seq
373 aa
AA seq
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MADIAVTNIQPDRAAVASQWQLIWWAFRRHKLAMVALVVTVLMYVVALVPGFFAINDPNL
QNARATFHPPQKLHLIDTENGFSFGPHYYPMKLTRDPETLAAIFKEDTTKRVDVQFFGRG
YEYSVFGLFNTNIHLIASPDKTTPLLLFGADRLGRDVFSRTVQGSQVSLSIGLVGVFLSL
MLGIVIGGISGYYGGRIDFFMQRVIDFVLSLPTIPIWLAMAAALPQDWPATLQYMMITII
LSLTGWAQLARVVRGRFLSLRTEEFVAAARLDGVREGRIIFRHMLPSFASHIIASITLAV
PAMILAETSLSFLGLGLQPPTISWGVLLREAQNIRSIATAPWLFLPGCAVVVAVMALNLL
GDGLRDAADPYNK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgccgttacaaatattcagccggatcgcgccgccgtcgcatcgcagtgg
cagctgatctggtgggcctttcgccgccacaagctggccatggtggcgctcgtcgttacc
gtgctgatgtatgtcgttgccttggttccgggcttcttcgccatcaacgatccaaatttg
caaaatgcgcgggcgacctttcatccgccgcagaaactgcatctgatcgataccgagaac
gggttttcattcggtccgcattattatccgatgaagctgacccgtgatccggaaacgctc
gccgccatcttcaaggaagacacgacgaagcgcgtcgacgtccaattcttcggacgcggc
tacgaatattccgtttttggcctgttcaacaccaacatccatctgatcgcctcgcccgac
aagaccacgccgctgcttctcttcggcgccgaccggcttgggcgtgatgttttcagcagg
acggtgcaaggctcgcaggtttcgctgtcgatcggcctcgtcggcgtcttcctgtcgttg
atgctcggcatcgtgatcggcggcatctccggatattacggtggccgcatcgatttcttc
atgcagcgtgtaatcgatttcgtgctgtcgctgccgacgataccgatctggctcgccatg
gctgcggcccttccgcaggattggccggcgacgctgcaatacatgatgatcacaatcatc
ctgtcgctgaccggctgggcccagcttgcccgcgtcgttcgtggtcgtttcctgtcattg
cgcaccgaagaattcgtcgctgccgccagactggatggcgttcgcgaaggccgcatcatc
tttcgccacatgctgccgagctttgccagccacatcatcgcgtcgatcacgctcgcagtg
ccggcgatgattctggccgaaacctctctttccttcctggggctcgggctgcagccgccg
accatttcctggggcgtgctgctgcgcgaggcccagaacattcgttcgatcgccacggcg
ccctggctcttcctgccgggctgcgccgtcgtggtcgccgtcatggcgctcaatctcctc
ggcgacggtctgcgcgacgcggccgacccctacaacaaatga
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