Rhizobium etli CFN 42: RHE_PF00241
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Entry
RHE_PF00241 CDS
T00317
Symbol
dppCf
Name
(GenBank) dipeptide ABC transporter, permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PF00241 (dppCf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00241 (dppCf)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_PF00241 (dppCf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ABC94131
UNAM_f:
RE1PF0000241
RhizoBase:
RHE_PF00241
UniProt:
Q2JZ55
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All DBs
Position
p42f:256938..257873
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AA seq
311 aa
AA seq
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MTISTEDADSTHASGFRNWLHASEPQGWFQSSAQQIHQGWHKFSLHPLGLAGLVIIVLLI
VVATAAPLLTSYDPIVQDMAGRLAPPSAEHWLGTDNFGRDVFSRVIYGARTTLYIIMLVT
IIVAPLGLLIGTFSGYFGGIVDEILMRITDIFLSFPGLVLALGFAAALGPGITNAIIAIS
LTAWPPIARLARAETLSLRKADYIAAVRLQGATSLAIITRQILPMCIPSVIVRVTLNMAG
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDA
LRDVLDPRGSE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacgatctccaccgaagacgcagacagcacccatgccagcggctttcgcaattggctg
cacgcgtccgagccacaaggctggttccaatcatcggcgcaacagatccatcagggctgg
cataagttcagcctccacccgctcggcctcgccggtctcgtcattatcgtattgctgatc
gtggtggcaacggcggctcccctgctcacgagctacgatccgatcgttcaggacatggcg
gggcggcttgcgccgccctctgcggagcattggctcggcaccgacaatttcggccgcgac
gtcttttctagggtgatctacggcgcccgtacgacgctctacatcatcatgctggtgacg
atcatcgtcgctccgctcggcctgctgatcggcaccttctcgggttatttcggtggcatc
gtcgacgagatcctgatgcgcatcaccgatattttcctctccttcccgggcctcgtgctg
gcgctcggttttgccgccgctctcggccccggcatcaccaatgcgatcatcgccatttcg
ctgacggcctggccgccgatcgcgcgcctcgcacgcgccgaaacgctcagcctgcgcaag
gcggattatatcgccgccgtgcgcctgcagggcgcgacctcgctcgcaatcattacccgc
cagatcctgccgatgtgcattccctcggtgatcgtgcgcgtcaccctcaacatggccggc
atcatcatcaccgccgccggtctcggctttctcggcctcggcgcgcaaccgccatggccg
gagtggggttcgatggccgccagcggccgcgaattcatgctcgacagcccctgggtgatc
gccgcgcccggcatcgccatcgcgctcgtcagcctcgccttcaatctcgtcggcgatgcg
ctgcgcgacgtactcgacccgagaggttcggaatga
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